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ngd --taxids seems to require gimme_taxa.py have the -j. Not sure if you want to update the documentation or one of the scripts?
ngd --taxids
gimme_taxa.py
-j
$ gimme_taxa.py -o taxids.txt Hyphomicrobiales $ ngd --dry-run --taxids taxids.txt --assembly-levels complete --refseq-categories representative bacteria ERROR: No downloads matched your filter. Please check your options. $ gimme_taxa.py -o taxids.txt Hyphomicrobiales -j $ ngd --dry-run --taxids taxids.txt --assembly-levels complete --refseq-categories representative bacteria Considering the following 158 assemblies for download: <snip> $ ngd --version 0.3.3
The text was updated successfully, but these errors were encountered:
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ngd --taxids
seems to requiregimme_taxa.py
have the-j
. Not sure if you want to update the documentation or one of the scripts?The text was updated successfully, but these errors were encountered: