New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Protein prediction and alignment #11
Comments
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Use blastx to predict protein function from amino acid sequence by comparing to other known proteins using homology and preserved domains, im pretty sure you can also install it as a module in python (https://blast.ncbi.nlm.nih.gov/Blast.cgi)
Use clustal Ω to align multiple amino acid or dna sequences (https://www.ebi.ac.uk/Tools/msa/clustalo/)
Also can use jpred to try and infer secondary protein structure (http://www.compbio.dundee.ac.uk/jpred/)
The text was updated successfully, but these errors were encountered: