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gmho.owl
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gmho.owl
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<?xml version="1.0"?>
<rdf:RDF xmlns="https://galenos.org.uk/ontologies/gmho.owl#"
xml:base="https://galenos.org.uk/ontologies/gmho.owl"
xmlns:dc="http://purl.org/dc/elements/1.1/"
xmlns:efo="http://www.ebi.ac.uk/efo/"
xmlns:obo="http://purl.obolibrary.org/obo/"
xmlns:owl="http://www.w3.org/2002/07/owl#"
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
xmlns:xml="http://www.w3.org/XML/1998/namespace"
xmlns:xsd="http://www.w3.org/2001/XMLSchema#"
xmlns:foaf="http://xmlns.com/foaf/0.1/"
xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"
xmlns:terms="http://purl.org/dc/terms/"
xmlns:schema="https://schema.org/"
xmlns:Property="https://www.wikidata.org/wiki/Property:"
xmlns:oboInOwl="http://www.geneontology.org/formats/oboInOwl#"
xmlns:owlready_ontology="http://www.lesfleursdunormal.fr/static/_downloads/owlready_ontology.owl#">
<owl:Ontology rdf:about="https://galenos.org.uk/ontologies/gmho.owl">
<owl:versionIRI rdf:resource="https://galenos.org.uk/ontologies/gmho.owl/2024-04-03"/>
</owl:Ontology>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Annotation properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/BFO_0000179 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000179">
<obo:IAO_0000111 xml:lang="en">BFO OWL specification label</obo:IAO_0000111>
<obo:IAO_0000115 xml:lang="en">Relates an entity in the ontology to the name of the variable that is used to represent it in the code that generates the BFO OWL file from the lispy specification.</obo:IAO_0000115>
<obo:IAO_0000232 xml:lang="en">Really of interest to developers only</obo:IAO_0000232>
<rdfs:label>BFO OWL specification label</rdfs:label>
<rdfs:label xml:lang="en">BFO OWL specification label</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/BFO_0000180 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000180">
<obo:IAO_0000111 xml:lang="en">BFO CLIF specification label</obo:IAO_0000111>
<obo:IAO_0000115 xml:lang="en">Relates an entity in the ontology to the term that is used to represent it in the the CLIF specification of BFO2</obo:IAO_0000115>
<obo:IAO_0000119>Person:Alan Ruttenberg</obo:IAO_0000119>
<obo:IAO_0000232 xml:lang="en">Really of interest to developers only</obo:IAO_0000232>
<rdfs:label>BFO CLIF specification label</rdfs:label>
<rdfs:label xml:lang="en">BFO CLIF specification label</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000111 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000111">
<obo:IAO_0000111>editor preferred label</obo:IAO_0000111>
<obo:IAO_0000111 xml:lang="en">editor preferred label</obo:IAO_0000111>
<obo:IAO_0000111>editor preferred term</obo:IAO_0000111>
<obo:IAO_0000111 xml:lang="en">editor preferred term</obo:IAO_0000111>
<obo:IAO_0000111>editor preferred term~editor preferred label</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<obo:IAO_0000115 xml:lang="en">The concise, meaningful, and human-friendly name for a class or property preferred by the ontology developers. (US-English)</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></obo:IAO_0000119>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label>editor preferred label</rdfs:label>
<rdfs:label xml:lang="en">editor preferred label</rdfs:label>
<rdfs:label>editor preferred term</rdfs:label>
<rdfs:label xml:lang="en">editor preferred term</rdfs:label>
<rdfs:label>editor preferred term~editor preferred label</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000112 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000112">
<obo:IAO_0000111 xml:lang="en">example</obo:IAO_0000111>
<obo:IAO_0000111 xml:lang="en">example of usage</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<obo:IAO_0000115 xml:lang="en">A phrase describing how a class name should be used. May also include other kinds of examples that facilitate immediate understanding of a class semantics, such as widely known prototypical subclasses or instances of the class. Although essential for high level terms, examples for low level terms (e.g., Affymetrix HU133 array) are not</obo:IAO_0000115>
<obo:IAO_0000115 xml:lang="en">A phrase describing how a term should be used and/or a citation to a work which uses it. May also include other kinds of examples that facilitate immediate understanding, such as widely know prototypes or instances of a class, or cases where a relation is said to hold.</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></obo:IAO_0000119>
<oboInOwl:hasDbXref>IAO:0000112</oboInOwl:hasDbXref>
<oboInOwl:hasOBONamespace>uberon</oboInOwl:hasOBONamespace>
<oboInOwl:id>example_of_usage</oboInOwl:id>
<oboInOwl:is_metadata_tag rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</oboInOwl:is_metadata_tag>
<oboInOwl:shorthand>example_of_usage</oboInOwl:shorthand>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label>example of usage</rdfs:label>
<rdfs:label xml:lang="en">example of usage</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000114 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000114">
<obo:IAO_0000111 xml:lang="en">has curation status</obo:IAO_0000111>
<obo:IAO_0000117 xml:lang="en">PERSON:Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000117 xml:lang="en">PERSON:Bill Bug</obo:IAO_0000117>
<obo:IAO_0000117 xml:lang="en">PERSON:Melanie Courtot</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">OBI_0000281</obo:IAO_0000119>
<rdfs:label>has curation status</rdfs:label>
<rdfs:label xml:lang="en">has curation status</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000115 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000115">
<obo:IAO_0000111>definition</obo:IAO_0000111>
<obo:IAO_0000111 xml:lang="en">definition</obo:IAO_0000111>
<obo:IAO_0000111>textual definition</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<obo:IAO_0000115>English language definitions of what NCI means by the concept. These are limited to 1024 characters. They may also include information about the definition's source and attribution in a form that can easily be interpreted by software.</obo:IAO_0000115>
<obo:IAO_0000115 xml:lang="en">The official OBI definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions.</obo:IAO_0000115>
<obo:IAO_0000115 xml:lang="en">The official definition, explaining the meaning of a class or property. Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions.</obo:IAO_0000115>
<obo:IAO_0000115>The official definition.</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">2012-04-05:
Barry Smith
The official OBI definition, explaining the meaning of a class or property: 'Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions' is terrible.
Can you fix to something like:
A statement of necessary and sufficient conditions explaining the meaning of an expression referring to a class or property.
Alan Ruttenberg
Your proposed definition is a reasonable candidate, except that it is very common that necessary and sufficient conditions are not given. Mostly they are necessary, occasionally they are necessary and sufficient or just sufficient. Often they use terms that are not themselves defined and so they effectively can't be evaluated by those criteria.
On the specifics of the proposed definition:
We don't have definitions of 'meaning' or 'expression' or 'property'. For 'reference' in the intended sense I think we use the term 'denotation'. For 'expression', I think we you mean symbol, or identifier. For 'meaning' it differs for class and property. For class we want documentation that let's the intended reader determine whether an entity is instance of the class, or not. For property we want documentation that let's the intended reader determine, given a pair of potential relata, whether the assertion that the relation holds is true. The 'intended reader' part suggests that we also specify who, we expect, would be able to understand the definition, and also generalizes over human and computer reader to include textual and logical definition.
Personally, I am more comfortable weakening definition to documentation, with instructions as to what is desirable.
We also have the outstanding issue of how to aim different definitions to different audiences. A clinical audience reading chebi wants a different sort of definition documentation/definition from a chemistry trained audience, and similarly there is a need for a definition that is adequate for an ontologist to work with.</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">2012-04-05:
Barry Smith
The official OBI definition, explaining the meaning of a class or property: 'Shall be Aristotelian, formalized and normalized. Can be augmented with colloquial definitions' is terrible.
Can you fix to something like:
A statement of necessary and sufficient conditions explaining the meaning of an expression referring to a class or property.
Alan Ruttenberg
Your proposed definition is a reasonable candidate, except that it is very common that necessary and sufficient conditions are not given. Mostly they are necessary, occasionally they are necessary and sufficient or just sufficient. Often they use terms that are not themselves defined and so they effectively can't be evaluated by those criteria.
On the specifics of the proposed definition:
We don't have definitions of 'meaning' or 'expression' or 'property'. For 'reference' in the intended sense I think we use the term 'denotation'. For 'expression', I think we you mean symbol, or identifier. For 'meaning' it differs for class and property. For class we want documentation that let's the intended reader determine whether an entity is instance of the class, or not. For property we want documentation that let's the intended reader determine, given a pair of potential relata, whether the assertion that the relation holds is true. The 'intended reader' part suggests that we also specify who, we expect, would be able to understand the definition, and also generalizes over human and computer reader to include textual and logical definition.
Personally, I am more comfortable weakening definition to documentation, with instructions as to what is desirable.
We also have the outstanding issue of how to aim different definitions to different audiences. A clinical audience reading chebi wants a different sort of definition documentation/definition from a chemistry trained audience, and similarly there is a need for a definition that is adequate for an ontologist to work with. </obo:IAO_0000116>
<obo:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></obo:IAO_0000119>
<oboInOwl:hasExactSynonym>DEFINITION</oboInOwl:hasExactSynonym>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label>definition</rdfs:label>
<rdfs:label xml:lang="en">definition</rdfs:label>
<rdfs:label>textual definition</rdfs:label>
</owl:AnnotationProperty>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget>The official definition.</owl:annotatedTarget>
<oboInOwl:hasDbXref>url:http://purl.obolibrary.org/obo/iao.owl</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://purl.obolibrary.org/obo/IAO_0000116 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000116">
<obo:IAO_0000111 xml:lang="en">editor note</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<obo:IAO_0000115 xml:lang="en">An administrative note intended for its editor. It may not be included in the publication version of the ontology, so it should contain nothing necessary for end users to understand the ontology.</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obfoundry.org/obo/obi></obo:IAO_0000119>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obofoundry.org/obo/obi></obo:IAO_0000119>
<oboInOwl:hasDbXref>IAO:0000116</oboInOwl:hasDbXref>
<oboInOwl:hasOBONamespace>uberon</oboInOwl:hasOBONamespace>
<oboInOwl:id>editor_note</oboInOwl:id>
<oboInOwl:is_metadata_tag rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</oboInOwl:is_metadata_tag>
<oboInOwl:is_metadata_tag rdf:datatype="http://www.w3.org/2001/XMLSchema#integer">1</oboInOwl:is_metadata_tag>
<oboInOwl:shorthand>editor_note</oboInOwl:shorthand>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label>editor note</rdfs:label>
<rdfs:label xml:lang="en">editor note</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000117 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000117">
<obo:IAO_0000111 xml:lang="en">definition editor</obo:IAO_0000111>
<obo:IAO_0000111 xml:lang="en">term editor</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<obo:IAO_0000115 xml:lang="en">Name of editor entering the definition in the file. The definition editor is a point of contact for information regarding the term. The definition editor may be, but is not always, the author of the definition, which may have been worked upon by several people</obo:IAO_0000115>
<obo:IAO_0000115 xml:lang="en">Name of editor entering the term in the file. The term editor is a point of contact for information regarding the term. The term editor may be, but is not always, the author of the definition, which may have been worked upon by several people</obo:IAO_0000115>
<obo:IAO_0000116 xml:lang="en">20110707, MC: label update to term editor and definition modified accordingly. See http://code.google.com/p/information-artifact-ontology/issues/detail?id=115.</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">20110707, MC: label update to term editor and definition modified accordingly. See https://github.com/information-artifact-ontology/IAO/issues/115.</obo:IAO_0000116>
<obo:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></obo:IAO_0000119>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label>definition editor</rdfs:label>
<rdfs:label xml:lang="en">definition editor</rdfs:label>
<rdfs:label>term editor</rdfs:label>
<rdfs:label xml:lang="en">term editor</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000118 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000118">
<obo:IAO_0000111 xml:lang="en">alternative label</obo:IAO_0000111>
<obo:IAO_0000111 xml:lang="en">alternative term</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000115 xml:lang="en">A label for a class or property that can be used to refer to the class or property instead of the preferred rdfs:label. Alternative labels should be used to indicate community- or context-specific labels, abbreviations, shorthand forms and the like.</obo:IAO_0000115>
<obo:IAO_0000115 xml:lang="en">An alternative name for a class or property which means the same thing as the preferred name (semantically equivalent)</obo:IAO_0000115>
<obo:IAO_0000117>OBO Operations committee</obo:IAO_0000117>
<obo:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></obo:IAO_0000119>
<rdfs:comment>Consider re-defing to: An alternative name for a class or property which can mean the same thing as the preferred name (semantically equivalent, narrow, broad or related).</rdfs:comment>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label xml:lang="en">alternative label</rdfs:label>
<rdfs:label>alternative term</rdfs:label>
<rdfs:label xml:lang="en">alternative term</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000119 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000119">
<obo:IAO_0000111 xml:lang="en">definition source</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<obo:IAO_0000115 xml:lang="en">Formal citation, e.g. identifier in external database to indicate / attribute source(s) for the definition. Free text indicate / attribute source(s) for the definition. EXAMPLE: Author Name, URI, MeSH Term C04, PUBMED ID, Wiki uri on 31.01.2007</obo:IAO_0000115>
<obo:IAO_0000115 xml:lang="en">formal citation, e.g. identifier in external database to indicate / attribute source(s) for the definition. Free text indicate / attribute source(s) for the definition. EXAMPLE: Author Name, URI, MeSH Term C04, PUBMED ID, Wiki uri on 31.01.2007</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">PERSON:Daniel Schober</obo:IAO_0000117>
<obo:IAO_0000119>Discussion on obo-discuss mailing-list, see http://bit.ly/hgm99w</obo:IAO_0000119>
<obo:IAO_0000119 xml:lang="en">Discussion on obo-discuss mailing-list, see http://bit.ly/hgm99w</obo:IAO_0000119>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></obo:IAO_0000119>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label>definition source</rdfs:label>
<rdfs:label xml:lang="en">definition source</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000232 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000232">
<obo:IAO_0000111 xml:lang="en">curator note</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000122"/>
<obo:IAO_0000115 xml:lang="en">An administrative note of use for a curator but of no use for a user</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">PERSON:Alan Ruttenberg</obo:IAO_0000117>
<oboInOwl:hasDbXref>IAO:0000232</oboInOwl:hasDbXref>
<oboInOwl:hasOBONamespace>uberon</oboInOwl:hasOBONamespace>
<oboInOwl:id>curator_notes</oboInOwl:id>
<oboInOwl:is_metadata_tag rdf:datatype="http://www.w3.org/2001/XMLSchema#integer">1</oboInOwl:is_metadata_tag>
<oboInOwl:shorthand>curator_notes</oboInOwl:shorthand>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label>curator note</rdfs:label>
<rdfs:label xml:lang="en">curator note</rdfs:label>
<rdfs:label>curator notes</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000233 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000233">
<obo:IAO_0000111 xml:lang="en">term tracker item</obo:IAO_0000111>
<obo:IAO_0000112 xml:lang="en">the URI for an OBI Terms ticket at sourceforge, such as https://sourceforge.net/p/obi/obi-terms/772/</obo:IAO_0000112>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000115 xml:lang="en">An IRI or similar locator for a request or discussion of an ontology term.</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">Person: Jie Zheng, Chris Stoeckert, Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">Person: Jie Zheng, Chris Stoeckert, Alan Ruttenberg</obo:IAO_0000119>
<oboInOwl:hasDbXref>IAO:0000233</oboInOwl:hasDbXref>
<oboInOwl:hasOBONamespace>uberon</oboInOwl:hasOBONamespace>
<oboInOwl:id>term_tracker_item</oboInOwl:id>
<oboInOwl:is_metadata_tag rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</oboInOwl:is_metadata_tag>
<oboInOwl:shorthand>term_tracker_item</oboInOwl:shorthand>
<rdfs:comment xml:lang="en">The 'tracker item' can associate a tracker with a specific ontology term.</rdfs:comment>
<rdfs:label>term tracker item</rdfs:label>
<rdfs:label xml:lang="en">term tracker item</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000412 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000412">
<obo:IAO_0000111 xml:lang="en">imported from</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000115 xml:lang="en">For external terms/classes, the ontology from which the term was imported</obo:IAO_0000115>
<obo:IAO_0000117 xml:lang="en">PERSON:Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000117 xml:lang="en">PERSON:Melanie Courtot</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">GROUP:OBI:<http://purl.obolibrary.org/obo/obi></obo:IAO_0000119>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label>imported from</rdfs:label>
<rdfs:label xml:lang="en">imported from</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000589 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000589">
<obo:IAO_0000111 xml:lang="en">OBO foundry unique label</obo:IAO_0000111>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000115 xml:lang="en">An alternative name for a class or property which is unique across the OBO Foundry.</obo:IAO_0000115>
<obo:IAO_0000116>The intended usage of that property is as follow: OBO foundry unique labels are automatically generated based on regular expressions provided by each ontology, so that SO could specify unique label = 'sequence ' + [label], etc. , MA could specify 'mouse + [label]' etc. Upon importing terms, ontology developers can choose to use the 'OBO foundry unique label' for an imported term or not. The same applies to tools .</obo:IAO_0000116>
<obo:IAO_0000116 xml:lang="en">The intended usage of that property is as follow: OBO foundry unique labels are automatically generated based on regular expressions provided by each ontology, so that SO could specify unique label = 'sequence ' + [label], etc. , MA could specify 'mouse + [label]' etc. Upon importing terms, ontology developers can choose to use the 'OBO foundry unique label' for an imported term or not. The same applies to tools .</obo:IAO_0000116>
<obo:IAO_0000117 xml:lang="en">PERSON:Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000117 xml:lang="en">PERSON:Bjoern Peters</obo:IAO_0000117>
<obo:IAO_0000117 xml:lang="en">PERSON:Chris Mungall</obo:IAO_0000117>
<obo:IAO_0000117 xml:lang="en">PERSON:Melanie Courtot</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">GROUP:OBO Foundry <http://obofoundry.org/></obo:IAO_0000119>
<rdfs:label xml:lang="en">OBO foundry unique label</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000600 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000600">
<obo:IAO_0000111 xml:lang="en">elucidation</obo:IAO_0000111>
<obo:IAO_0000117 xml:lang="en">person:Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">Person:Barry Smith</obo:IAO_0000119>
<obo:IAO_0000600 xml:lang="en">Primitive terms in a highest-level ontology such as BFO are terms which are so basic to our understanding of reality that there is no way of defining them in a non-circular fashion. For these, therefore, we can provide only elucidations, supplemented by examples and by axioms</obo:IAO_0000600>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label>elucidation</rdfs:label>
<rdfs:label xml:lang="en">elucidation</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000601 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000601">
<obo:IAO_0000111 xml:lang="en">has associated axiom(nl)</obo:IAO_0000111>
<obo:IAO_0000117 xml:lang="en">Person:Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">Person:Alan Ruttenberg</obo:IAO_0000119>
<obo:IAO_0000600 xml:lang="en">An axiom associated with a term expressed using natural language</obo:IAO_0000600>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label>has associated axiom(nl)</rdfs:label>
<rdfs:label xml:lang="en">has associated axiom(nl)</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0000602 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0000602">
<obo:IAO_0000111 xml:lang="en">has associated axiom(fol)</obo:IAO_0000111>
<obo:IAO_0000117 xml:lang="en">Person:Alan Ruttenberg</obo:IAO_0000117>
<obo:IAO_0000119 xml:lang="en">Person:Alan Ruttenberg</obo:IAO_0000119>
<obo:IAO_0000600 xml:lang="en">An axiom expressed in first order logic using CLIF syntax</obo:IAO_0000600>
<rdfs:isDefinedBy rdf:resource="http://purl.obolibrary.org/obo/iao.owl"/>
<rdfs:label>has associated axiom(fol)</rdfs:label>
<rdfs:label xml:lang="en">has associated axiom(fol)</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.obolibrary.org/obo/IAO_0010000 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/IAO_0010000"/>
<!-- http://purl.obolibrary.org/obo/SEPIO_0000061 -->
<owl:AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/SEPIO_0000061">
<rdfs:comment>Used to capture development notes and design decisions or questions. All annotations using this property should be removed before publishing / releasing the ontology to the public (but ideally retained in some place as valuable documentation).</rdfs:comment>
<rdfs:label xml:lang="en">SEPIO_editor_note</rdfs:label>
</owl:AnnotationProperty>
<!-- http://purl.org/dc/elements/1.1/creator -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/creator"/>
<!-- http://purl.org/dc/elements/1.1/date -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/elements/1.1/date"/>
<!-- http://purl.org/dc/terms/source -->
<owl:AnnotationProperty rdf:about="http://purl.org/dc/terms/source"/>
<!-- http://www.ebi.ac.uk/efo/ArrayExpress_label -->
<owl:AnnotationProperty rdf:about="http://www.ebi.ac.uk/efo/ArrayExpress_label"/>
<!-- http://www.ebi.ac.uk/efo/EFO_URI -->
<owl:AnnotationProperty rdf:about="http://www.ebi.ac.uk/efo/EFO_URI"/>
<!-- http://www.ebi.ac.uk/efo/branch_class -->
<owl:AnnotationProperty rdf:about="http://www.ebi.ac.uk/efo/branch_class">
<rdfs:comment>For use in the EMBL-EBI ArrayExpress interface.</rdfs:comment>
</owl:AnnotationProperty>
<!-- http://www.ebi.ac.uk/efo/gwas_trait -->
<owl:AnnotationProperty rdf:about="http://www.ebi.ac.uk/efo/gwas_trait"/>
<!-- http://www.ebi.ac.uk/efo/organizational_class -->
<owl:AnnotationProperty rdf:about="http://www.ebi.ac.uk/efo/organizational_class"/>
<!-- http://www.ebi.ac.uk/efo/source_definition -->
<owl:AnnotationProperty rdf:about="http://www.ebi.ac.uk/efo/source_definition"/>
<!-- http://www.geneontology.org/formats/oboInOwl#created_by -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#created_by">
<rdfs:label>created_by</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.geneontology.org/formats/oboInOwl#creation_date -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#creation_date"/>
<!-- http://www.geneontology.org/formats/oboInOwl#hasAlternativeId -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasAlternativeId">
<rdfs:label>has_alternative_id</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasBroadSynonym">
<rdfs:label>has_broad_synonym</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.geneontology.org/formats/oboInOwl#hasDbXref -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasDbXref">
<rdfs:label>database_cross_reference</rdfs:label>
<rdfs:label xml:lang="en">has database cross reference</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.geneontology.org/formats/oboInOwl#hasExactSynonym -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasExactSynonym">
<obo:IAO_0000115>An alternative label for a class or property which has the exact same meaning than the preferred name/primary label.</obo:IAO_0000115>
<obo:IAO_0000115>An alternative label for a given entity such as a commonly used abbreviation or synonym. </obo:IAO_0000115>
<obo:IAO_0000115>Fully qualified synonym, contains the string, term type, source, and an optional source code if appropriate. Each subfield is deliniated to facilitate interpretation by software.</obo:IAO_0000115>
<obo:IAO_0000115>Synonym of the term.</obo:IAO_0000115>
<obo:IAO_0000117 rdf:resource="http://orcid.org/0000-0001-5208-3432"/>
<obo:IAO_0000233>https://github.com/information-artifact-ontology/ontology-metadata/issues/20</obo:IAO_0000233>
<oboInOwl:hasExactSynonym>FULL_SYN</oboInOwl:hasExactSynonym>
<oboInOwl:hasExactSynonym>Synonym with Source Data</oboInOwl:hasExactSynonym>
<rdfs:label>has exact synonym</rdfs:label>
<rdfs:label xml:lang="en">has exact synonym</rdfs:label>
<rdfs:label>has_exact_synonym</rdfs:label>
<rdfs:seeAlso>https://github.com/information-artifact-ontology/ontology-metadata/issues/20</rdfs:seeAlso>
</owl:AnnotationProperty>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://www.geneontology.org/formats/oboInOwl#hasExactSynonym"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget>Synonym of the term.</owl:annotatedTarget>
<rdfs:comment>url:http://www.geneontology.org/formats/oboInOwl#hasExactSynonym</rdfs:comment>
</owl:Axiom>
<!-- http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasNarrowSynonym">
<rdfs:label>has_narrow_synonym</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.geneontology.org/formats/oboInOwl#hasOBONamespace -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasOBONamespace">
<rdfs:comment>disease_ontology</rdfs:comment>
<rdfs:label>has_obo_namespace</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasRelatedSynonym">
<rdfs:label>has_related_synonym</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.geneontology.org/formats/oboInOwl#hasSynonymType -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#hasSynonymType"/>
<!-- http://www.geneontology.org/formats/oboInOwl#id -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#id">
<obo:IAO_0000115>An identifier for an individual entity.</obo:IAO_0000115>
<rdfs:label>id</rdfs:label>
</owl:AnnotationProperty>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://www.geneontology.org/formats/oboInOwl#id"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget>An identifier for an individual entity.</owl:annotatedTarget>
<oboInOwl:hasDbXref>url:http://purl.obolibrary.org/obo/IAO_0020000</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://www.geneontology.org/formats/oboInOwl#inSubset -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#inSubset">
<rdfs:label>in_subset</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.geneontology.org/formats/oboInOwl#is_metadata_tag -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#is_metadata_tag"/>
<!-- http://www.geneontology.org/formats/oboInOwl#shorthand -->
<owl:AnnotationProperty rdf:about="http://www.geneontology.org/formats/oboInOwl#shorthand">
<rdfs:label>shorthand</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.lesfleursdunormal.fr/static/_downloads/owlready_ontology.owl#python_name -->
<owl:AnnotationProperty rdf:about="http://www.lesfleursdunormal.fr/static/_downloads/owlready_ontology.owl#python_name"/>
<!-- http://www.w3.org/2000/01/rdf-schema#comment -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#comment">
<rdfs:label xml:lang="en">comment</rdfs:label>
</owl:AnnotationProperty>
<!-- http://www.w3.org/2000/01/rdf-schema#isDefinedBy -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#isDefinedBy">
<obo:IAO_0000589>is defined by</obo:IAO_0000589>
<rdfs:isDefinedBy rdf:resource="http://www.w3.org/2000/01/rdf-schema.owl"/>
</owl:AnnotationProperty>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://www.w3.org/2000/01/rdf-schema#isDefinedBy"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000589"/>
<owl:annotatedTarget>is defined by</owl:annotatedTarget>
<rdfs:comment>This is an experimental annotation</rdfs:comment>
</owl:Axiom>
<!-- http://www.w3.org/2000/01/rdf-schema#label -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#label">
<obo:IAO_0000111>label</obo:IAO_0000111>
<obo:IAO_0000115>A human readable name for this class.</obo:IAO_0000115>
<rdfs:comment xml:lang="en">A human-readable name for the subject.</rdfs:comment>
<rdfs:isDefinedBy rdf:resource="http://www.w3.org/2000/01/rdf-schema.owl"/>
<rdfs:label>label</rdfs:label>
<rdfs:label xml:lang="en">label</rdfs:label>
</owl:AnnotationProperty>
<owl:Axiom>
<owl:annotatedSource rdf:resource="http://www.w3.org/2000/01/rdf-schema#label"/>
<owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
<owl:annotatedTarget>A human readable name for this class.</owl:annotatedTarget>
<oboInOwl:hasDbXref>url:http://www.w3.org/2000/01/rdf-schema#label</oboInOwl:hasDbXref>
</owl:Axiom>
<!-- http://www.w3.org/2000/01/rdf-schema#seeAlso -->
<owl:AnnotationProperty rdf:about="http://www.w3.org/2000/01/rdf-schema#seeAlso"/>
<!-- https://schema.org/alternateName -->
<owl:AnnotationProperty rdf:about="https://schema.org/alternateName">
<rdfs:label xml:lang="en">alternate name</rdfs:label>
</owl:AnnotationProperty>
<!-- https://www.wikidata.org/wiki/Property:P5191 -->
<owl:AnnotationProperty rdf:about="https://www.wikidata.org/wiki/Property:P5191">
<owlready_ontology:python_name xml:lang="en">derived_from</owlready_ontology:python_name>
<rdfs:label xml:lang="en">derived from</rdfs:label>
</owl:AnnotationProperty>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Object Properties
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://purl.obolibrary.org/obo/BFO_0000063 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/BFO_0000063">
<rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0002222"/>
<obo:IAO_0000111 xml:lang="en">precedes</obo:IAO_0000111>
<obo:IAO_0000115 xml:lang="en">x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.</obo:IAO_0000115>
<oboInOwl:inSubset rdf:resource="http://purl.obolibrary.org/obo/ro/subsets#ro-eco"/>
<rdfs:label xml:lang="en">precedes</rdfs:label>
</owl:ObjectProperty>
<!-- http://purl.obolibrary.org/obo/RO_0002222 -->
<owl:ObjectProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002222">
<rdfs:subPropertyOf rdf:resource="http://www.w3.org/2002/07/owl#topObjectProperty"/>
<obo:IAO_0000114 rdf:resource="http://purl.obolibrary.org/obo/IAO_0000125"/>
<obo:IAO_0000117 rdf:resource="https://orcid.org/0000-0002-6601-2165"/>
<obo:IAO_0000119 rdf:resource="https://en.wikipedia.org/wiki/Allen%27s_interval_algebra"/>
<obo:IAO_0000232>Do not use this relation directly. It is ended as a grouping for relations between occurrents involving the relative timing of their starts and ends.</obo:IAO_0000232>
<terms:source rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">https://docs.google.com/document/d/1kBv1ep_9g3sTR-SD3jqzFqhuwo9TPNF-l-9fUDbO6rM/edit?pli=1</terms:source>
<oboInOwl:inSubset rdf:resource="http://purl.obolibrary.org/obo/ro/subsets#ro-eco"/>
<rdfs:comment>A relation that holds between two occurrents. This is a grouping relation that collects together all the Allen relations.</rdfs:comment>
<rdfs:label xml:lang="en">temporally related to</rdfs:label>
</owl:ObjectProperty>
<!-- http://www.w3.org/2002/07/owl#topObjectProperty -->
<owl:ObjectProperty rdf:about="http://www.w3.org/2002/07/owl#topObjectProperty"/>
<!--
///////////////////////////////////////////////////////////////////////////////////////
//
// Classes
//
///////////////////////////////////////////////////////////////////////////////////////
-->
<!-- http://addictovocab.org/ADDICTO_0000352 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0000352">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MF_0000016"/>
<rdfs:subClassOf rdf:resource="https://galenos.org.uk/ontologies/GMHO_0000190"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A person who has reached maturity.</obo:IAO_0000115>
<rdfs:comment>For use in research contexts the minimum age needs to be specified.</rdfs:comment>
<rdfs:label>adult</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0000381 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0000381">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MF_0000031"/>
<obo:IAO_0000115>A cognitive representation of themselves by a person or a group about themselves.</obo:IAO_0000115>
<rdfs:comment>This entity is more than self-identity of an individual as it includes group identity.</rdfs:comment>
<rdfs:label>identity</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0000399 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0000399">
<rdfs:subClassOf rdf:resource="http://addictovocab.org/ADDICTO_0000381"/>
<obo:IAO_0000115>An identity that a person has about themselves.</obo:IAO_0000115>
<obo:IAO_0000232>The term 'self' sounds tautologous but is required to reflect the fact that this is not identity in terms of who you are but how you represent yourself to yourself.</obo:IAO_0000232>
<rdfs:comment>The cognitive representation includes multiple aspects and some of these are social. For example, group memberships, cultural norms. Collective identity as a shared attribute of group is related to this but is separate.</rdfs:comment>
<rdfs:label>self-identity</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0001050 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0001050">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MF_0000016"/>
<rdfs:subClassOf rdf:resource="https://galenos.org.uk/ontologies/GMHO_0000190"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A person between 13 and 19 years of age.</obo:IAO_0000115>
<obo:IAO_0000115>A person who is between the ages of 13 and 19.</obo:IAO_0000115>
<rdfs:label>teenager</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0001255 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0001255">
<rdfs:subClassOf rdf:resource="http://addictovocab.org/ADDICTO_0001265"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A mixed study design in which two or more groups experience the same study processes but in a different order.</obo:IAO_0000115>
<rdfs:label>cross over design</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0001257 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0001257">
<rdfs:subClassOf rdf:resource="http://addictovocab.org/ADDICTO_0001258"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A non-interventional study design in which study participants who have been identified as having (case) or not having (control) some characteristic of interest are compared on other characteristics to establish whether these are associated with being a case or control.</obo:IAO_0000115>
<rdfs:label>case-control study design</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0001258 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0001258">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0500000"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A study design in which study participants are not planned to experience an intervention as a part of the study process.</obo:IAO_0000115>
<rdfs:label>non-interventional study design</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0001262 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0001262">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0500000"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A study design in which measurements taken on the same study participants at two or more different times in different circumstances are compared.</obo:IAO_0000115>
<rdfs:label>repeated measure design</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0001263 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0001263">
<rdfs:subClassOf rdf:resource="http://addictovocab.org/ADDICTO_0001267"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>An interventional study design in which participants are randomly allocated to receive one of two or more interventions or no intervention using a study randomisation process.</obo:IAO_0000115>
<obo:IAO_0000118>RCT, randomised controlled trial</obo:IAO_0000118>
<rdfs:label>randomised controlled trial design</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0001265 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0001265">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0500000"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A study design in which measurements taken on two or more groups of study participants at two or more times are compared allowing differences to be assessed between groups and over time.</obo:IAO_0000115>
<rdfs:label>mixed study design</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0001267 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0001267">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OBI_0500000"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A study design that includes specification of some intervention as part of the study process.</obo:IAO_0000115>
<obo:IAO_0000118>controlled trial, study with at least one comparator group</obo:IAO_0000118>
<rdfs:label>interventional study design</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0001271 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0001271">
<rdfs:subClassOf rdf:resource="http://addictovocab.org/ADDICTO_0001263"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A randomised controlled trial design in which participants are randomised to study on more than one occasion during the study.</obo:IAO_0000115>
<rdfs:label>sequential multiple randomised controlled trial design</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0001277 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0001277">
<rdfs:subClassOf rdf:resource="http://addictovocab.org/ADDICTO_0001263"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A randomised controlled trial design in which pre-existing groups of participants are randomly allocated to intervention arms</obo:IAO_0000115>
<obo:IAO_0000118>cRCT, CRT, cluster-randomised controlled intervention trial, cluster-randomised controlled trial</obo:IAO_0000118>
<rdfs:label>cluster randomised controlled trial design</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0001278 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0001278">
<rdfs:subClassOf rdf:resource="http://addictovocab.org/ADDICTO_0001267"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>An interventional study design in which participants are allocated to receive one or two or more interventions or no intervention using a quasi-random process.</obo:IAO_0000115>
<obo:IAO_0000118>qRCT, quasi-randomised controlled trial</obo:IAO_0000118>
<rdfs:label>quasi-randomised controlled trial design</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0001279 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0001279">
<rdfs:subClassOf rdf:resource="http://addictovocab.org/ADDICTO_0001267"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>An interventional study design in which all the participants receive the same type of intervention.</obo:IAO_0000115>
<obo:IAO_0000118>intervention without comparator group</obo:IAO_0000118>
<rdfs:label>single-arm intervention design</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0001292 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0001292">
<rdfs:subClassOf rdf:resource="https://galenos.org.uk/ontologies/GMHO_0000191"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A repeated measures study design involving multiple repeated measurements taken in each of two or more conditions facilitating inferential statistical analyses to be undertaken to output statistical parameters from data sets for each individual participant.</obo:IAO_0000115>
<rdfs:label>n-of-1 study design</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0001297 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0001297">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000038"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A temporal interval between the end of one intervention and the beginning of another in a cross-over research study</obo:IAO_0000115>
<rdfs:label>wash-out period</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0001307 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0001307">
<rdfs:subClassOf rdf:resource="http://humanbehaviourchange.org/ontology/BCIO_015092"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A health status in which the person presents fewer or lower intensity of symptoms compared to their previous symptom presentation, and the current symptoms minimally interfere with their life.</obo:IAO_0000115>
<rdfs:label>In remission</rdfs:label>
</owl:Class>
<!-- http://addictovocab.org/ADDICTO_0001308 -->
<owl:Class rdf:about="http://addictovocab.org/ADDICTO_0001308">
<rdfs:subClassOf rdf:resource="http://humanbehaviourchange.org/ontology/BCIO_015092"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A health status in which the symptoms of a person suffering from a disorder have reverted from a desired level to an undesired level.</obo:IAO_0000115>
<rdfs:label>relapsed</rdfs:label>
</owl:Class>
<!-- http://humanbehaviourchange.org/ontology/BCIO_006119 -->
<owl:Class rdf:about="http://humanbehaviourchange.org/ontology/BCIO_006119">
<rdfs:subClassOf rdf:resource="http://humanbehaviourchange.org/ontology/BCIO_050239"/>
<obo:IAO_0000114>Published</obo:IAO_0000114>
<obo:IAO_0000115>Learning that involves changing the strength of association between two or more mental processes.</obo:IAO_0000115>
<rdfs:comment>While associative learning is often defined as learning an association between a stimulus and response, the stimulus has to be perceived. Therefore, associative learning is between perceiving or processing information about a stimulus (a mental process) and one or more other mental processes.
The label 'associative learning' is also used for a behaviour change technique (BCT) in the BCT Taxonomy v1 (Michie et al., 2013). The definition for this BCT reads as follows: 'Present a neutral stimulus jointly with a stimulus that already elicits the behavior repeatedly until the neutral stimulus elicits that behavior.' As indicated by the definition, the BCT is the deliberate presentation of a stimulus, whereas the MoA is a learning process that occurs in the brain.</rdfs:comment>
<rdfs:label>associative learning</rdfs:label>
</owl:Class>
<!-- http://humanbehaviourchange.org/ontology/BCIO_008500 -->
<owl:Class rdf:about="http://humanbehaviourchange.org/ontology/BCIO_008500">
<rdfs:subClassOf rdf:resource="http://humanbehaviourchange.org/ontology/BCIO_050315"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A BCI attribute that is its temporal organisation.</obo:IAO_0000115>
<rdfs:label>BCI schedule of delivery</rdfs:label>
</owl:Class>
<!-- http://humanbehaviourchange.org/ontology/BCIO_008515 -->
<owl:Class rdf:about="http://humanbehaviourchange.org/ontology/BCIO_008515">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0000027"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A data item that is the number of contact events in an intervention temporal part.</obo:IAO_0000115>
<rdfs:label>number of contact events</rdfs:label>
</owl:Class>
<!-- http://humanbehaviourchange.org/ontology/BCIO_008535 -->
<owl:Class rdf:about="http://humanbehaviourchange.org/ontology/BCIO_008535">
<rdfs:subClassOf rdf:resource="http://humanbehaviourchange.org/ontology/BCIO_008500"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A BCI schedule of delivery in which the frequency and duration of BCI temporal parts are uniform across the course of a BCI or BCI part.</obo:IAO_0000115>
<rdfs:label>regular intervention schedule</rdfs:label>
</owl:Class>
<!-- http://humanbehaviourchange.org/ontology/BCIO_008540 -->
<owl:Class rdf:about="http://humanbehaviourchange.org/ontology/BCIO_008540">
<rdfs:subClassOf rdf:resource="http://humanbehaviourchange.org/ontology/BCIO_008500"/>
<obo:IAO_0000114>External</obo:IAO_0000114>
<obo:IAO_0000115>A BCI schedule of delivery in which the frequency and duration of contact events differ over the course of a temporal part or BCI.</obo:IAO_0000115>
<rdfs:label>irregular intervention schedule</rdfs:label>
</owl:Class>
<!-- http://humanbehaviourchange.org/ontology/BCIO_010000 -->
<owl:Class rdf:about="http://humanbehaviourchange.org/ontology/BCIO_010000">
<rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000023"/>
<obo:IAO_0000112>This includes individual people, groups of people, and organisations.</obo:IAO_0000112>
<obo:IAO_0000114>Published</obo:IAO_0000114>
<obo:IAO_0000115>A role played by a person, population or organisation that provides a BCI.</obo:IAO_0000115>
<obo:IAO_0000118>BCI source</obo:IAO_0000118>
<rdfs:label>behaviour change intervention source</rdfs:label>
</owl:Class>