Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Parallel load of libraries can be sluggish. #107

Open
charles-plessy opened this issue Oct 10, 2023 · 0 comments
Open

Parallel load of libraries can be sluggish. #107

charles-plessy opened this issue Oct 10, 2023 · 0 comments

Comments

@charles-plessy
Copy link
Owner

On large libraries ( ~100 million read pairs) in BAM format, parallel load is sluggish. I could not yet track the issue, and I do not know if it also affect other formats (single-end BAM, BED12, ...).

Parallel load was originally developed for loading shallow single-cell libraries in BED12 format.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant