Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

aspera-cli singularity container has some ruby issues #45784

Open
maxulysse opened this issue Feb 13, 2024 · 0 comments
Open

aspera-cli singularity container has some ruby issues #45784

maxulysse opened this issue Feb 13, 2024 · 0 comments

Comments

@maxulysse
Copy link

Not sure if the right location to open this issue, but, I've noticed this issue when using singularity with aspera-cli aka ascli

singularity exec https://depot.galaxyproject.org/singularity/aspera-cli:4.14.0--hdfd78af_1 ascli --version
<internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require': cannot load such file -- webrick (LoadError)
	from <internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require'
	from /usr/local/share/rubygems/gems/aspera-cli-4.14.0/lib/aspera/web_server_simple.rb:3:in `<top (required)>'
	from <internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require'
	from <internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require'
	from /usr/local/share/rubygems/gems/aspera-cli-4.14.0/lib/aspera/web_auth.rb:3:in `<top (required)>'
	from <internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require'
	from <internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require'
	from /usr/local/share/rubygems/gems/aspera-cli-4.14.0/lib/aspera/oauth.rb:4:in `<top (required)>'
	from <internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require'
	from <internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require'
	from /usr/local/share/rubygems/gems/aspera-cli-4.14.0/lib/aspera/rest.rb:4:in `<top (required)>'
	from <internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require'
	from <internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require'
	from /usr/local/share/rubygems/gems/aspera-cli-4.14.0/lib/aspera/uri_reader.rb:4:in `<top (required)>'
	from <internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require'
	from <internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require'
	from /usr/local/share/rubygems/gems/aspera-cli-4.14.0/lib/aspera/cli/extended_value.rb:3:in `<top (required)>'
	from <internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require'
	from <internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require'
	from /usr/local/share/rubygems/gems/aspera-cli-4.14.0/lib/aspera/cli/manager.rb:6:in `<top (required)>'
	from <internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require'
	from <internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require'
	from /usr/local/share/rubygems/gems/aspera-cli-4.14.0/lib/aspera/cli/main.rb:3:in `<top (required)>'
	from <internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require'
	from <internal:/usr/local/lib/ruby/3.2.0/rubygems/core_ext/kernel_require.rb>:85:in `require'
	from /usr/local/bin/ascli:31:in `<main>'

That being said ascp does work.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant