diff --git a/7t_trt/sub-01/ses-1/fmap/sub-01_ses-1_run-1_phasediff.json b/7t_trt/sub-01/ses-1/fmap/sub-01_ses-1_run-1_phasediff.json index 0d963b4c9..6bf2192e3 100644 --- a/7t_trt/sub-01/ses-1/fmap/sub-01_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-01/ses-1/fmap/sub-01_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-01/ses-1/func/sub-01_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-01/ses-1/func/sub-01_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-01/ses-1/fmap/sub-01_ses-1_run-2_phasediff.json b/7t_trt/sub-01/ses-1/fmap/sub-01_ses-1_run-2_phasediff.json index 6011c41b8..c1b62b709 100644 --- a/7t_trt/sub-01/ses-1/fmap/sub-01_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-01/ses-1/fmap/sub-01_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-01/ses-1/func/sub-01_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-01/ses-1/func/sub-01_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-01/ses-2/fmap/sub-01_ses-2_run-1_phasediff.json b/7t_trt/sub-01/ses-2/fmap/sub-01_ses-2_run-1_phasediff.json index dd899cf70..65b2f5c70 100644 --- a/7t_trt/sub-01/ses-2/fmap/sub-01_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-01/ses-2/fmap/sub-01_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-01/ses-2/func/sub-01_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-01/ses-2/func/sub-01_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-01/ses-2/fmap/sub-01_ses-2_run-2_phasediff.json b/7t_trt/sub-01/ses-2/fmap/sub-01_ses-2_run-2_phasediff.json index d37fb7751..5e10aed2e 100644 --- a/7t_trt/sub-01/ses-2/fmap/sub-01_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-01/ses-2/fmap/sub-01_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-01/ses-2/func/sub-01_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-01/ses-2/func/sub-01_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-02/ses-1/fmap/sub-02_ses-1_run-1_phasediff.json b/7t_trt/sub-02/ses-1/fmap/sub-02_ses-1_run-1_phasediff.json index 1180f80ce..a9cce07ce 100644 --- a/7t_trt/sub-02/ses-1/fmap/sub-02_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-02/ses-1/fmap/sub-02_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-02/ses-1/func/sub-02_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-02/ses-1/func/sub-02_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-02/ses-1/fmap/sub-02_ses-1_run-2_phasediff.json b/7t_trt/sub-02/ses-1/fmap/sub-02_ses-1_run-2_phasediff.json index b91e1b85d..688434b39 100644 --- a/7t_trt/sub-02/ses-1/fmap/sub-02_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-02/ses-1/fmap/sub-02_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-02/ses-1/func/sub-02_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-02/ses-1/func/sub-02_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-02/ses-2/fmap/sub-02_ses-2_run-1_phasediff.json b/7t_trt/sub-02/ses-2/fmap/sub-02_ses-2_run-1_phasediff.json index 59b3965b1..346215754 100644 --- a/7t_trt/sub-02/ses-2/fmap/sub-02_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-02/ses-2/fmap/sub-02_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-02/ses-2/func/sub-02_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-02/ses-2/func/sub-02_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-02/ses-2/fmap/sub-02_ses-2_run-2_phasediff.json b/7t_trt/sub-02/ses-2/fmap/sub-02_ses-2_run-2_phasediff.json index 870943861..90eafe735 100644 --- a/7t_trt/sub-02/ses-2/fmap/sub-02_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-02/ses-2/fmap/sub-02_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-02/ses-2/func/sub-02_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-02/ses-2/func/sub-02_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-03/ses-1/fmap/sub-03_ses-1_run-1_phasediff.json b/7t_trt/sub-03/ses-1/fmap/sub-03_ses-1_run-1_phasediff.json index 7f652282a..d4a0d099c 100644 --- a/7t_trt/sub-03/ses-1/fmap/sub-03_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-03/ses-1/fmap/sub-03_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-03/ses-1/func/sub-03_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-03/ses-1/func/sub-03_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-03/ses-1/fmap/sub-03_ses-1_run-2_phasediff.json b/7t_trt/sub-03/ses-1/fmap/sub-03_ses-1_run-2_phasediff.json index 3a5ce33e6..01103274e 100644 --- a/7t_trt/sub-03/ses-1/fmap/sub-03_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-03/ses-1/fmap/sub-03_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-03/ses-1/func/sub-03_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-03/ses-1/func/sub-03_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-03/ses-2/fmap/sub-03_ses-2_run-1_phasediff.json b/7t_trt/sub-03/ses-2/fmap/sub-03_ses-2_run-1_phasediff.json index 54d77bd8f..3c05c6607 100644 --- a/7t_trt/sub-03/ses-2/fmap/sub-03_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-03/ses-2/fmap/sub-03_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-03/ses-2/func/sub-03_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-03/ses-2/func/sub-03_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-03/ses-2/fmap/sub-03_ses-2_run-2_phasediff.json b/7t_trt/sub-03/ses-2/fmap/sub-03_ses-2_run-2_phasediff.json index 33b46cdff..9816f62de 100644 --- a/7t_trt/sub-03/ses-2/fmap/sub-03_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-03/ses-2/fmap/sub-03_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-03/ses-2/func/sub-03_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-03/ses-2/func/sub-03_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-04/ses-1/fmap/sub-04_ses-1_run-1_phasediff.json b/7t_trt/sub-04/ses-1/fmap/sub-04_ses-1_run-1_phasediff.json index b094cf416..82067261b 100644 --- a/7t_trt/sub-04/ses-1/fmap/sub-04_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-04/ses-1/fmap/sub-04_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-04/ses-1/func/sub-04_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-04/ses-1/func/sub-04_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-04/ses-1/fmap/sub-04_ses-1_run-2_phasediff.json b/7t_trt/sub-04/ses-1/fmap/sub-04_ses-1_run-2_phasediff.json index ec6c24571..3a7177e9d 100644 --- a/7t_trt/sub-04/ses-1/fmap/sub-04_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-04/ses-1/fmap/sub-04_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-04/ses-1/func/sub-04_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-04/ses-1/func/sub-04_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-04/ses-2/fmap/sub-04_ses-2_run-1_phasediff.json b/7t_trt/sub-04/ses-2/fmap/sub-04_ses-2_run-1_phasediff.json index 64bdeeeba..07982e23f 100644 --- a/7t_trt/sub-04/ses-2/fmap/sub-04_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-04/ses-2/fmap/sub-04_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-04/ses-2/func/sub-04_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-04/ses-2/func/sub-04_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-04/ses-2/fmap/sub-04_ses-2_run-2_phasediff.json b/7t_trt/sub-04/ses-2/fmap/sub-04_ses-2_run-2_phasediff.json index 2bb537119..1e9cd25c0 100644 --- a/7t_trt/sub-04/ses-2/fmap/sub-04_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-04/ses-2/fmap/sub-04_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-04/ses-2/func/sub-04_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-04/ses-2/func/sub-04_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-05/ses-1/fmap/sub-05_ses-1_run-1_phasediff.json b/7t_trt/sub-05/ses-1/fmap/sub-05_ses-1_run-1_phasediff.json index 804f52dbc..c4eed136e 100644 --- a/7t_trt/sub-05/ses-1/fmap/sub-05_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-05/ses-1/fmap/sub-05_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-05/ses-1/func/sub-05_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-05/ses-1/func/sub-05_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-05/ses-1/fmap/sub-05_ses-1_run-2_phasediff.json b/7t_trt/sub-05/ses-1/fmap/sub-05_ses-1_run-2_phasediff.json index 564872a4c..4e81d96e5 100644 --- a/7t_trt/sub-05/ses-1/fmap/sub-05_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-05/ses-1/fmap/sub-05_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-05/ses-1/func/sub-05_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-05/ses-1/func/sub-05_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-05/ses-2/fmap/sub-05_ses-2_run-1_phasediff.json b/7t_trt/sub-05/ses-2/fmap/sub-05_ses-2_run-1_phasediff.json index b771ed02f..f246c840d 100644 --- a/7t_trt/sub-05/ses-2/fmap/sub-05_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-05/ses-2/fmap/sub-05_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-05/ses-2/func/sub-05_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-05/ses-2/func/sub-05_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-05/ses-2/fmap/sub-05_ses-2_run-2_phasediff.json b/7t_trt/sub-05/ses-2/fmap/sub-05_ses-2_run-2_phasediff.json index 72ee37edd..068b3d857 100644 --- a/7t_trt/sub-05/ses-2/fmap/sub-05_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-05/ses-2/fmap/sub-05_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": 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b/7t_trt/sub-06/ses-1/fmap/sub-06_ses-1_run-2_phasediff.json index 57f97aeb2..9a999e6f0 100644 --- a/7t_trt/sub-06/ses-1/fmap/sub-06_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-06/ses-1/fmap/sub-06_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-06/ses-1/func/sub-06_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-06/ses-1/func/sub-06_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-06/ses-2/fmap/sub-06_ses-2_run-1_phasediff.json b/7t_trt/sub-06/ses-2/fmap/sub-06_ses-2_run-1_phasediff.json index a9b395e94..286f86fd0 100644 --- a/7t_trt/sub-06/ses-2/fmap/sub-06_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-06/ses-2/fmap/sub-06_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-06/ses-2/func/sub-06_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-06/ses-2/func/sub-06_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-06/ses-2/fmap/sub-06_ses-2_run-2_phasediff.json b/7t_trt/sub-06/ses-2/fmap/sub-06_ses-2_run-2_phasediff.json index cf66d89a5..dbc7c8e83 100644 --- a/7t_trt/sub-06/ses-2/fmap/sub-06_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-06/ses-2/fmap/sub-06_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-06/ses-2/func/sub-06_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-06/ses-2/func/sub-06_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-07/ses-1/fmap/sub-07_ses-1_run-1_phasediff.json b/7t_trt/sub-07/ses-1/fmap/sub-07_ses-1_run-1_phasediff.json index 78fd0721f..4b673dd64 100644 --- a/7t_trt/sub-07/ses-1/fmap/sub-07_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-07/ses-1/fmap/sub-07_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-07/ses-1/func/sub-07_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-07/ses-1/func/sub-07_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-07/ses-1/fmap/sub-07_ses-1_run-2_phasediff.json b/7t_trt/sub-07/ses-1/fmap/sub-07_ses-1_run-2_phasediff.json index 39f5998e0..ec989ae51 100644 --- a/7t_trt/sub-07/ses-1/fmap/sub-07_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-07/ses-1/fmap/sub-07_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": 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b/7t_trt/sub-07/ses-2/fmap/sub-07_ses-2_run-2_phasediff.json index 278325ab2..56aba5b4a 100644 --- a/7t_trt/sub-07/ses-2/fmap/sub-07_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-07/ses-2/fmap/sub-07_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-07/ses-2/func/sub-07_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-07/ses-2/func/sub-07_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-08/ses-1/fmap/sub-08_ses-1_run-1_phasediff.json b/7t_trt/sub-08/ses-1/fmap/sub-08_ses-1_run-1_phasediff.json index 1fb47f26d..6dbcf8842 100644 --- a/7t_trt/sub-08/ses-1/fmap/sub-08_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-08/ses-1/fmap/sub-08_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": 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b/7t_trt/sub-08/ses-2/fmap/sub-08_ses-2_run-1_phasediff.json index 7bd06e6e1..50fc2ff0e 100644 --- a/7t_trt/sub-08/ses-2/fmap/sub-08_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-08/ses-2/fmap/sub-08_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-08/ses-2/func/sub-08_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-08/ses-2/func/sub-08_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-08/ses-2/fmap/sub-08_ses-2_run-2_phasediff.json b/7t_trt/sub-08/ses-2/fmap/sub-08_ses-2_run-2_phasediff.json index 6216d1cea..fce1d1034 100644 --- a/7t_trt/sub-08/ses-2/fmap/sub-08_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-08/ses-2/fmap/sub-08_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": 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b/7t_trt/sub-09/ses-1/fmap/sub-09_ses-1_run-2_phasediff.json index 7a1916934..e0b35e93e 100644 --- a/7t_trt/sub-09/ses-1/fmap/sub-09_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-09/ses-1/fmap/sub-09_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-09/ses-1/func/sub-09_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-09/ses-1/func/sub-09_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-09/ses-2/fmap/sub-09_ses-2_run-1_phasediff.json b/7t_trt/sub-09/ses-2/fmap/sub-09_ses-2_run-1_phasediff.json index 9aa0dbf3e..bbe78d768 100644 --- a/7t_trt/sub-09/ses-2/fmap/sub-09_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-09/ses-2/fmap/sub-09_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": 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b/7t_trt/sub-10/ses-1/fmap/sub-10_ses-1_run-1_phasediff.json index 014c49b11..2901c3bfa 100644 --- a/7t_trt/sub-10/ses-1/fmap/sub-10_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-10/ses-1/fmap/sub-10_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-10/ses-1/func/sub-10_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-10/ses-1/func/sub-10_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-10/ses-1/fmap/sub-10_ses-1_run-2_phasediff.json b/7t_trt/sub-10/ses-1/fmap/sub-10_ses-1_run-2_phasediff.json index 726c52286..d834f51ec 100644 --- a/7t_trt/sub-10/ses-1/fmap/sub-10_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-10/ses-1/fmap/sub-10_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": 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b/7t_trt/sub-10/ses-2/fmap/sub-10_ses-2_run-2_phasediff.json index 11f92c0d9..0eabba447 100644 --- a/7t_trt/sub-10/ses-2/fmap/sub-10_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-10/ses-2/fmap/sub-10_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-10/ses-2/func/sub-10_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-10/ses-2/func/sub-10_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-11/ses-1/fmap/sub-11_ses-1_run-1_phasediff.json b/7t_trt/sub-11/ses-1/fmap/sub-11_ses-1_run-1_phasediff.json index 6587ff059..b322e8f28 100644 --- a/7t_trt/sub-11/ses-1/fmap/sub-11_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-11/ses-1/fmap/sub-11_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": 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b/7t_trt/sub-11/ses-2/fmap/sub-11_ses-2_run-1_phasediff.json index de66dda2e..9b9ed610d 100644 --- a/7t_trt/sub-11/ses-2/fmap/sub-11_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-11/ses-2/fmap/sub-11_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-11/ses-2/func/sub-11_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-11/ses-2/func/sub-11_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-11/ses-2/fmap/sub-11_ses-2_run-2_phasediff.json b/7t_trt/sub-11/ses-2/fmap/sub-11_ses-2_run-2_phasediff.json index d9a0c9f34..e13b291ae 100644 --- a/7t_trt/sub-11/ses-2/fmap/sub-11_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-11/ses-2/fmap/sub-11_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": 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b/7t_trt/sub-12/ses-1/fmap/sub-12_ses-1_run-2_phasediff.json index 92c3ce746..d29b1a6fd 100644 --- a/7t_trt/sub-12/ses-1/fmap/sub-12_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-12/ses-1/fmap/sub-12_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-12/ses-1/func/sub-12_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-12/ses-1/func/sub-12_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-12/ses-2/fmap/sub-12_ses-2_run-1_phasediff.json b/7t_trt/sub-12/ses-2/fmap/sub-12_ses-2_run-1_phasediff.json index 29f4f54c8..d95b7d0b6 100644 --- a/7t_trt/sub-12/ses-2/fmap/sub-12_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-12/ses-2/fmap/sub-12_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-12/ses-2/func/sub-12_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-12/ses-2/func/sub-12_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-12/ses-2/fmap/sub-12_ses-2_run-2_phasediff.json b/7t_trt/sub-12/ses-2/fmap/sub-12_ses-2_run-2_phasediff.json index 52ad6197f..a77e9d9c1 100644 --- a/7t_trt/sub-12/ses-2/fmap/sub-12_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-12/ses-2/fmap/sub-12_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-12/ses-2/func/sub-12_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-12/ses-2/func/sub-12_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-13/ses-1/fmap/sub-13_ses-1_run-1_phasediff.json b/7t_trt/sub-13/ses-1/fmap/sub-13_ses-1_run-1_phasediff.json index 37394b75b..6f684fc70 100644 --- a/7t_trt/sub-13/ses-1/fmap/sub-13_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-13/ses-1/fmap/sub-13_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-13/ses-1/func/sub-13_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-13/ses-1/func/sub-13_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-13/ses-1/fmap/sub-13_ses-1_run-2_phasediff.json b/7t_trt/sub-13/ses-1/fmap/sub-13_ses-1_run-2_phasediff.json index 7f07f4d1a..3a30cc003 100644 --- a/7t_trt/sub-13/ses-1/fmap/sub-13_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-13/ses-1/fmap/sub-13_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-13/ses-1/func/sub-13_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-13/ses-1/func/sub-13_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-13/ses-2/fmap/sub-13_ses-2_run-1_phasediff.json b/7t_trt/sub-13/ses-2/fmap/sub-13_ses-2_run-1_phasediff.json index fd63a0ad5..8e55a61f5 100644 --- a/7t_trt/sub-13/ses-2/fmap/sub-13_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-13/ses-2/fmap/sub-13_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-13/ses-2/func/sub-13_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-13/ses-2/func/sub-13_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-13/ses-2/fmap/sub-13_ses-2_run-2_phasediff.json b/7t_trt/sub-13/ses-2/fmap/sub-13_ses-2_run-2_phasediff.json index 401fc9110..48887ac37 100644 --- a/7t_trt/sub-13/ses-2/fmap/sub-13_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-13/ses-2/fmap/sub-13_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-13/ses-2/func/sub-13_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-13/ses-2/func/sub-13_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-14/ses-1/fmap/sub-14_ses-1_run-1_phasediff.json b/7t_trt/sub-14/ses-1/fmap/sub-14_ses-1_run-1_phasediff.json index 42668a461..983471829 100644 --- a/7t_trt/sub-14/ses-1/fmap/sub-14_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-14/ses-1/fmap/sub-14_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-14/ses-1/func/sub-14_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-14/ses-1/func/sub-14_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-14/ses-1/fmap/sub-14_ses-1_run-2_phasediff.json b/7t_trt/sub-14/ses-1/fmap/sub-14_ses-1_run-2_phasediff.json index 1072cec68..1307fb735 100644 --- a/7t_trt/sub-14/ses-1/fmap/sub-14_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-14/ses-1/fmap/sub-14_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-14/ses-1/func/sub-14_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-14/ses-1/func/sub-14_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-14/ses-2/fmap/sub-14_ses-2_run-1_phasediff.json b/7t_trt/sub-14/ses-2/fmap/sub-14_ses-2_run-1_phasediff.json index 622d40a2e..91bfc9c59 100644 --- a/7t_trt/sub-14/ses-2/fmap/sub-14_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-14/ses-2/fmap/sub-14_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-14/ses-2/func/sub-14_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-14/ses-2/func/sub-14_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-14/ses-2/fmap/sub-14_ses-2_run-2_phasediff.json b/7t_trt/sub-14/ses-2/fmap/sub-14_ses-2_run-2_phasediff.json index 2b0dae152..a0ea10424 100644 --- a/7t_trt/sub-14/ses-2/fmap/sub-14_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-14/ses-2/fmap/sub-14_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-14/ses-2/func/sub-14_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-14/ses-2/func/sub-14_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-15/ses-1/fmap/sub-15_ses-1_run-1_phasediff.json b/7t_trt/sub-15/ses-1/fmap/sub-15_ses-1_run-1_phasediff.json index f345d0083..8e3a5b0a6 100644 --- a/7t_trt/sub-15/ses-1/fmap/sub-15_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-15/ses-1/fmap/sub-15_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-15/ses-1/func/sub-15_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-15/ses-1/func/sub-15_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-15/ses-1/fmap/sub-15_ses-1_run-2_phasediff.json b/7t_trt/sub-15/ses-1/fmap/sub-15_ses-1_run-2_phasediff.json index fa5a76d23..d0dc2b8d6 100644 --- a/7t_trt/sub-15/ses-1/fmap/sub-15_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-15/ses-1/fmap/sub-15_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-15/ses-1/func/sub-15_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-15/ses-1/func/sub-15_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-15/ses-2/fmap/sub-15_ses-2_run-1_phasediff.json b/7t_trt/sub-15/ses-2/fmap/sub-15_ses-2_run-1_phasediff.json index b0850c1d7..f92312153 100644 --- a/7t_trt/sub-15/ses-2/fmap/sub-15_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-15/ses-2/fmap/sub-15_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-15/ses-2/func/sub-15_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-15/ses-2/func/sub-15_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-15/ses-2/fmap/sub-15_ses-2_run-2_phasediff.json b/7t_trt/sub-15/ses-2/fmap/sub-15_ses-2_run-2_phasediff.json index 5cc4c83cf..671b49aa1 100644 --- a/7t_trt/sub-15/ses-2/fmap/sub-15_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-15/ses-2/fmap/sub-15_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-15/ses-2/func/sub-15_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-15/ses-2/func/sub-15_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-16/ses-1/fmap/sub-16_ses-1_run-1_phasediff.json b/7t_trt/sub-16/ses-1/fmap/sub-16_ses-1_run-1_phasediff.json index 763d85b7a..4f0bc951e 100644 --- a/7t_trt/sub-16/ses-1/fmap/sub-16_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-16/ses-1/fmap/sub-16_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-16/ses-1/func/sub-16_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-16/ses-1/func/sub-16_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-16/ses-1/fmap/sub-16_ses-1_run-2_phasediff.json b/7t_trt/sub-16/ses-1/fmap/sub-16_ses-1_run-2_phasediff.json index 65e7971c0..17351564b 100644 --- a/7t_trt/sub-16/ses-1/fmap/sub-16_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-16/ses-1/fmap/sub-16_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": 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b/7t_trt/sub-16/ses-2/fmap/sub-16_ses-2_run-2_phasediff.json index 7371d901a..166937434 100644 --- a/7t_trt/sub-16/ses-2/fmap/sub-16_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-16/ses-2/fmap/sub-16_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-16/ses-2/func/sub-16_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-16/ses-2/func/sub-16_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-17/ses-1/fmap/sub-17_ses-1_run-1_phasediff.json b/7t_trt/sub-17/ses-1/fmap/sub-17_ses-1_run-1_phasediff.json index 62f3799a9..87f1e58c7 100644 --- a/7t_trt/sub-17/ses-1/fmap/sub-17_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-17/ses-1/fmap/sub-17_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-17/ses-1/func/sub-17_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-17/ses-1/func/sub-17_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-17/ses-1/fmap/sub-17_ses-1_run-2_phasediff.json b/7t_trt/sub-17/ses-1/fmap/sub-17_ses-1_run-2_phasediff.json index 711a5a781..3f7fb48ac 100644 --- a/7t_trt/sub-17/ses-1/fmap/sub-17_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-17/ses-1/fmap/sub-17_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-17/ses-1/func/sub-17_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-17/ses-1/func/sub-17_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-17/ses-2/fmap/sub-17_ses-2_run-1_phasediff.json b/7t_trt/sub-17/ses-2/fmap/sub-17_ses-2_run-1_phasediff.json index 92de43f96..ccbc84d49 100644 --- a/7t_trt/sub-17/ses-2/fmap/sub-17_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-17/ses-2/fmap/sub-17_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-17/ses-2/func/sub-17_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-17/ses-2/func/sub-17_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-17/ses-2/fmap/sub-17_ses-2_run-2_phasediff.json b/7t_trt/sub-17/ses-2/fmap/sub-17_ses-2_run-2_phasediff.json index d5b6c9807..0875c09c2 100644 --- a/7t_trt/sub-17/ses-2/fmap/sub-17_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-17/ses-2/fmap/sub-17_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": 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b/7t_trt/sub-18/ses-1/fmap/sub-18_ses-1_run-2_phasediff.json index 20066c95e..f9828c286 100644 --- a/7t_trt/sub-18/ses-1/fmap/sub-18_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-18/ses-1/fmap/sub-18_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-18/ses-1/func/sub-18_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-18/ses-1/func/sub-18_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-18/ses-2/fmap/sub-18_ses-2_run-1_phasediff.json b/7t_trt/sub-18/ses-2/fmap/sub-18_ses-2_run-1_phasediff.json index 2f296d96d..195da2c15 100644 --- a/7t_trt/sub-18/ses-2/fmap/sub-18_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-18/ses-2/fmap/sub-18_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-18/ses-2/func/sub-18_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-18/ses-2/func/sub-18_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-18/ses-2/fmap/sub-18_ses-2_run-2_phasediff.json b/7t_trt/sub-18/ses-2/fmap/sub-18_ses-2_run-2_phasediff.json index 5c7fd3c27..47a328ac1 100644 --- a/7t_trt/sub-18/ses-2/fmap/sub-18_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-18/ses-2/fmap/sub-18_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-18/ses-2/func/sub-18_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-18/ses-2/func/sub-18_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-19/ses-1/fmap/sub-19_ses-1_run-1_phasediff.json b/7t_trt/sub-19/ses-1/fmap/sub-19_ses-1_run-1_phasediff.json index 0e5b569f0..369b9e055 100644 --- a/7t_trt/sub-19/ses-1/fmap/sub-19_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-19/ses-1/fmap/sub-19_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-19/ses-1/func/sub-19_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-19/ses-1/func/sub-19_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-19/ses-1/fmap/sub-19_ses-1_run-2_phasediff.json b/7t_trt/sub-19/ses-1/fmap/sub-19_ses-1_run-2_phasediff.json index 255dd4d3f..930fe76ab 100644 --- a/7t_trt/sub-19/ses-1/fmap/sub-19_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-19/ses-1/fmap/sub-19_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-19/ses-1/func/sub-19_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-19/ses-1/func/sub-19_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-19/ses-2/fmap/sub-19_ses-2_run-1_phasediff.json b/7t_trt/sub-19/ses-2/fmap/sub-19_ses-2_run-1_phasediff.json index 998cf0b41..586ee0ed3 100644 --- a/7t_trt/sub-19/ses-2/fmap/sub-19_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-19/ses-2/fmap/sub-19_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-19/ses-2/func/sub-19_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-19/ses-2/func/sub-19_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-19/ses-2/fmap/sub-19_ses-2_run-2_phasediff.json b/7t_trt/sub-19/ses-2/fmap/sub-19_ses-2_run-2_phasediff.json index 41f20cf39..285507c2f 100644 --- a/7t_trt/sub-19/ses-2/fmap/sub-19_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-19/ses-2/fmap/sub-19_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-19/ses-2/func/sub-19_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-19/ses-2/func/sub-19_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-20/ses-1/fmap/sub-20_ses-1_run-1_phasediff.json b/7t_trt/sub-20/ses-1/fmap/sub-20_ses-1_run-1_phasediff.json index d384c86a5..972869281 100644 --- a/7t_trt/sub-20/ses-1/fmap/sub-20_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-20/ses-1/fmap/sub-20_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-20/ses-1/func/sub-20_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-20/ses-1/func/sub-20_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-20/ses-1/fmap/sub-20_ses-1_run-2_phasediff.json b/7t_trt/sub-20/ses-1/fmap/sub-20_ses-1_run-2_phasediff.json index c19abd5c4..120646eba 100644 --- a/7t_trt/sub-20/ses-1/fmap/sub-20_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-20/ses-1/fmap/sub-20_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-20/ses-1/func/sub-20_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-20/ses-1/func/sub-20_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-20/ses-2/fmap/sub-20_ses-2_run-1_phasediff.json b/7t_trt/sub-20/ses-2/fmap/sub-20_ses-2_run-1_phasediff.json index cd73e303d..adc6f5365 100644 --- a/7t_trt/sub-20/ses-2/fmap/sub-20_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-20/ses-2/fmap/sub-20_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-20/ses-2/func/sub-20_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-20/ses-2/func/sub-20_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-20/ses-2/fmap/sub-20_ses-2_run-2_phasediff.json b/7t_trt/sub-20/ses-2/fmap/sub-20_ses-2_run-2_phasediff.json index d9de9d4be..a02cfbc3e 100644 --- a/7t_trt/sub-20/ses-2/fmap/sub-20_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-20/ses-2/fmap/sub-20_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-20/ses-2/func/sub-20_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-20/ses-2/func/sub-20_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-21/ses-1/fmap/sub-21_ses-1_run-1_phasediff.json b/7t_trt/sub-21/ses-1/fmap/sub-21_ses-1_run-1_phasediff.json index d01354aa5..2ab035d45 100644 --- a/7t_trt/sub-21/ses-1/fmap/sub-21_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-21/ses-1/fmap/sub-21_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-21/ses-1/func/sub-21_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-21/ses-1/func/sub-21_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-21/ses-1/fmap/sub-21_ses-1_run-2_phasediff.json b/7t_trt/sub-21/ses-1/fmap/sub-21_ses-1_run-2_phasediff.json index 2a94e2530..fce919467 100644 --- a/7t_trt/sub-21/ses-1/fmap/sub-21_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-21/ses-1/fmap/sub-21_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-21/ses-1/func/sub-21_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-21/ses-1/func/sub-21_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-21/ses-2/fmap/sub-21_ses-2_run-1_phasediff.json b/7t_trt/sub-21/ses-2/fmap/sub-21_ses-2_run-1_phasediff.json index 20268471f..7b4b277a3 100644 --- a/7t_trt/sub-21/ses-2/fmap/sub-21_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-21/ses-2/fmap/sub-21_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": 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b/7t_trt/sub-22/ses-1/fmap/sub-22_ses-1_run-1_phasediff.json index e5f50a814..22cf28834 100644 --- a/7t_trt/sub-22/ses-1/fmap/sub-22_ses-1_run-1_phasediff.json +++ b/7t_trt/sub-22/ses-1/fmap/sub-22_ses-1_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-22/ses-1/func/sub-22_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-22/ses-1/func/sub-22_ses-1_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-22/ses-1/fmap/sub-22_ses-1_run-2_phasediff.json b/7t_trt/sub-22/ses-1/fmap/sub-22_ses-1_run-2_phasediff.json index 29a3e90df..b71204c67 100644 --- a/7t_trt/sub-22/ses-1/fmap/sub-22_ses-1_run-2_phasediff.json +++ b/7t_trt/sub-22/ses-1/fmap/sub-22_ses-1_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-22/ses-1/func/sub-22_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-22/ses-1/func/sub-22_ses-1_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-22/ses-2/fmap/sub-22_ses-2_run-1_phasediff.json b/7t_trt/sub-22/ses-2/fmap/sub-22_ses-2_run-1_phasediff.json index b8dd75155..829faec8d 100644 --- a/7t_trt/sub-22/ses-2/fmap/sub-22_ses-2_run-1_phasediff.json +++ b/7t_trt/sub-22/ses-2/fmap/sub-22_ses-2_run-1_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-22/ses-2/func/sub-22_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-22/ses-2/func/sub-22_ses-2_task-rest_acq-fullbrain_run-1_bold.nii.gz" +} \ No newline at end of file diff --git a/7t_trt/sub-22/ses-2/fmap/sub-22_ses-2_run-2_phasediff.json b/7t_trt/sub-22/ses-2/fmap/sub-22_ses-2_run-2_phasediff.json index 2560f484b..5ce1aa9b1 100644 --- a/7t_trt/sub-22/ses-2/fmap/sub-22_ses-2_run-2_phasediff.json +++ b/7t_trt/sub-22/ses-2/fmap/sub-22_ses-2_run-2_phasediff.json @@ -1 +1,5 @@ -{"EchoTime2": 0.00702, "EchoTime1": 0.006, "IntendedFor": "bids::sub-22/ses-2/func/sub-22_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz"} +{ + "EchoTime2": 0.00702, + "EchoTime1": 0.006, + "IntendedFor": "bids::sub-22/ses-2/func/sub-22_ses-2_task-rest_acq-fullbrain_run-2_bold.nii.gz" +} \ No newline at end of file diff --git a/asl002/sub-Sub103/perf/sub-Sub103_m0scan.json b/asl002/sub-Sub103/perf/sub-Sub103_m0scan.json index 08c1801d1..55e50f455 100644 --- a/asl002/sub-Sub103/perf/sub-Sub103_m0scan.json +++ b/asl002/sub-Sub103/perf/sub-Sub103_m0scan.json @@ -1,19 +1,42 @@ -{"Manufacturer":"Philips", -"ManufacturersModelName":"Achieva", -"SoftwareVersions":"5.1.7_5.1.7.2", -"MagneticFieldStrength":3, -"ReceiveCoilName":"MULTI_COIL", -"MRAcquisitionType":"2D", -"PulseSequenceType":"EPI", -"ScanningSequence":"GR", -"SequenceVariant":"SK", -"ScanOptions":"FS", -"PulseSequenceDetails":"Philips 2D epi pcasl product", -"PartialFourier":0.421875, -"PhaseEncodingDirection":"j", -"TotalReadoutTime":0.02198740305218437, -"EchoTime":0.015001, -"SliceTiming":[0,0.0385,0.077,0.1155,0.154,0.1925,0.231,0.2695,0.308,0.3465,0.385,0.4235,0.462,0.5004999999999999,0.539,0.5775,0.616,0.6545,0.6929999999999999,0.7315], -"FlipAngle":90, -"RepetitionTimePreparation":9, -"IntendedFor":"perf/sub-Sub103_asl.nii.gz"} \ No newline at end of file +{ + "Manufacturer": "Philips", + "ManufacturersModelName": "Achieva", + "SoftwareVersions": "5.1.7_5.1.7.2", + "MagneticFieldStrength": 3, + "ReceiveCoilName": "MULTI_COIL", + "MRAcquisitionType": "2D", + "PulseSequenceType": "EPI", + "ScanningSequence": "GR", + "SequenceVariant": "SK", + "ScanOptions": "FS", + "PulseSequenceDetails": "Philips 2D epi pcasl product", + "PartialFourier": 0.421875, + "PhaseEncodingDirection": "j", + "TotalReadoutTime": 0.02198740305218437, + "EchoTime": 0.015001, + "SliceTiming": [ + 0, + 0.0385, + 0.077, + 0.1155, + 0.154, + 0.1925, + 0.231, + 0.2695, + 0.308, + 0.3465, + 0.385, + 0.4235, + 0.462, + 0.5005, + 0.539, + 0.5775, + 0.616, + 0.6545, + 0.693, + 0.7315 + ], + "FlipAngle": 90, + "RepetitionTimePreparation": 9, + "IntendedFor": "bids::sub-Sub103/perf/sub-Sub103_asl.nii.gz" +} \ No newline at end of file diff --git a/asl003/sub-Sub1/perf/sub-Sub1_m0scan.json b/asl003/sub-Sub1/perf/sub-Sub1_m0scan.json index 0e2384cb7..1b54141e5 100644 --- a/asl003/sub-Sub1/perf/sub-Sub1_m0scan.json +++ b/asl003/sub-Sub1/perf/sub-Sub1_m0scan.json @@ -1,23 +1,29 @@ -{"Manufacturer":"Siemens", -"ManufacturersModelName":"TrioTim", -"SoftwareVersions":"N4_VB17A_LATEST_20090307", -"MagneticFieldStrength":3, -"ReceiveCoilName":"32Ch_Head", -"ReceiveCoilActiveElements":"C:HEA;HEP", -"MRAcquisitionType":"3D", -"PulseSequenceType":"3Dgrase", -"ScanningSequence":"RM", -"SequenceVariant":"SK", -"ScanOptions":"SAT1_FS", -"SequenceName":"grs3d3d1_1152t0", -"PulseSequenceDetails":"Bremen sequence: fme_ASL_Collection_002A", -"PartialFourier":1, -"PhaseEncodingDirection":"j-", -"EffectiveEchoSpacing":0.00052, -"TotalReadoutTime":0.0104, -"EchoTime":0.01614, -"DwellTime":3.4e-06, -"FlipAngle":180, -"RepetitionTimePreparation":6, -"IntendedFor":"perf/sub-Sub1_asl.nii.gz", -"AcquisitionVoxelsize":[2,2,5]} \ No newline at end of file +{ + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "SoftwareVersions": "N4_VB17A_LATEST_20090307", + "MagneticFieldStrength": 3, + "ReceiveCoilName": "32Ch_Head", + "ReceiveCoilActiveElements": "C:HEA;HEP", + "MRAcquisitionType": "3D", + "PulseSequenceType": "3Dgrase", + "ScanningSequence": "RM", + "SequenceVariant": "SK", + "ScanOptions": "SAT1_FS", + "SequenceName": "grs3d3d1_1152t0", + "PulseSequenceDetails": "Bremen sequence: fme_ASL_Collection_002A", + "PartialFourier": 1, + "PhaseEncodingDirection": "j-", + "EffectiveEchoSpacing": 0.00052, + "TotalReadoutTime": 0.0104, + "EchoTime": 0.01614, + "DwellTime": 3.4e-06, + "FlipAngle": 180, + "RepetitionTimePreparation": 6, + "IntendedFor": "bids::sub-Sub1/perf/sub-Sub1_asl.nii.gz", + "AcquisitionVoxelsize": [ + 2, + 2, + 5 + ] +} \ No newline at end of file diff --git a/asl004/sub-Sub1/fmap/sub-Sub1_dir-pa_m0scan.json b/asl004/sub-Sub1/fmap/sub-Sub1_dir-pa_m0scan.json index 59a582ffd..31b28a61d 100644 --- a/asl004/sub-Sub1/fmap/sub-Sub1_dir-pa_m0scan.json +++ b/asl004/sub-Sub1/fmap/sub-Sub1_dir-pa_m0scan.json @@ -1,12 +1,39 @@ -{"Manufacturer":"Siemens", -"ManufacturersModelName":"TrioTim", -"MagneticFieldStrength":3, -"MRAcquisitionType":"2D", -"PulseSequenceType":"EPI", -"PhaseEncodingDirection":"j", -"TotalReadoutTime":0.06, -"EchoTime":0.014, -"SliceTiming":[0,0.0452,0.0904,0.1356,0.1808,0.226,0.2712,0.3164,0.3616,0.4068,0.452,0.4972,0.5424,0.5876,0.6328,0.678,0.7232,0.7684,0.8136,0.8588,0.904,0.9492,0.9944,1.0396], -"FlipAngle":90, -"RepetitionTimePreparation":4.8, -"IntendedFor":"perf/sub-Sub1_m0scan.nii.gz"} \ No newline at end of file +{ + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "MagneticFieldStrength": 3, + "MRAcquisitionType": "2D", + "PulseSequenceType": "EPI", + "PhaseEncodingDirection": "j", + "TotalReadoutTime": 0.06, + "EchoTime": 0.014, + "SliceTiming": [ + 0, + 0.0452, + 0.0904, + 0.1356, + 0.1808, + 0.226, + 0.2712, + 0.3164, + 0.3616, + 0.4068, + 0.452, + 0.4972, + 0.5424, + 0.5876, + 0.6328, + 0.678, + 0.7232, + 0.7684, + 0.8136, + 0.8588, + 0.904, + 0.9492, + 0.9944, + 1.0396 + ], + "FlipAngle": 90, + "RepetitionTimePreparation": 4.8, + "IntendedFor": "bids::sub-Sub1/perf/sub-Sub1_m0scan.nii.gz" +} \ No newline at end of file diff --git a/asl004/sub-Sub1/perf/sub-Sub1_m0scan.json b/asl004/sub-Sub1/perf/sub-Sub1_m0scan.json index 36612c562..8007e5005 100644 --- a/asl004/sub-Sub1/perf/sub-Sub1_m0scan.json +++ b/asl004/sub-Sub1/perf/sub-Sub1_m0scan.json @@ -1,12 +1,39 @@ -{"Manufacturer":"Siemens", -"ManufacturersModelName":"TrioTim", -"MagneticFieldStrength":3, -"MRAcquisitionType":"2D", -"PulseSequenceType":"EPI", -"PhaseEncodingDirection":"j-", -"TotalReadoutTime":0.06, -"EchoTime":0.014, -"SliceTiming":[0,0.0452,0.0904,0.1356,0.1808,0.226,0.2712,0.3164,0.3616,0.4068,0.452,0.4972,0.5424,0.5876,0.6328,0.678,0.7232,0.7684,0.8136,0.8588,0.904,0.9492,0.9944,1.0396], -"FlipAngle":90, -"RepetitionTimePreparation":4.8, -"IntendedFor":"perf/sub-Sub1_asl.nii.gz"} \ No newline at end of file +{ + "Manufacturer": "Siemens", + "ManufacturersModelName": "TrioTim", + "MagneticFieldStrength": 3, + "MRAcquisitionType": "2D", + "PulseSequenceType": "EPI", + "PhaseEncodingDirection": "j-", + "TotalReadoutTime": 0.06, + "EchoTime": 0.014, + "SliceTiming": [ + 0, + 0.0452, + 0.0904, + 0.1356, + 0.1808, + 0.226, + 0.2712, + 0.3164, + 0.3616, + 0.4068, + 0.452, + 0.4972, + 0.5424, + 0.5876, + 0.6328, + 0.678, + 0.7232, + 0.7684, + 0.8136, + 0.8588, + 0.904, + 0.9492, + 0.9944, + 1.0396 + ], + "FlipAngle": 90, + "RepetitionTimePreparation": 4.8, + "IntendedFor": "bids::sub-Sub1/perf/sub-Sub1_asl.nii.gz" +} \ No newline at end of file diff --git a/asl005/sub-Sub103/perf/sub-Sub103_m0scan.json b/asl005/sub-Sub103/perf/sub-Sub103_m0scan.json index d0ab6d61a..c38f2a0db 100644 --- a/asl005/sub-Sub103/perf/sub-Sub103_m0scan.json +++ b/asl005/sub-Sub103/perf/sub-Sub103_m0scan.json @@ -1,19 +1,21 @@ -{"Manufacturer":"Siemens", -"ManufacturersModelName":"Prisma_fit", -"SoftwareVersions":"syngo_MR_E11", -"MagneticFieldStrength":3, -"ReceiveCoilName":"HeadNeck_64", -"ReceiveCoilActiveElements":"HC1-6", -"MRAcquisitionType":"3D", -"PulseSequenceType":"3Dgrase", -"ScanningSequence":"EP", -"SequenceVariant":"SK", -"ScanOptions":"SAT1_FS", -"SequenceName":"tg818I3d1_6720", -"PulseSequenceDetails":"Siemens 3D GRASE product sequence (WIP): tgse_csl_818", -"PartialFourier":1, -"EchoTime":0.01328, -"DwellTime":3.2e-06, -"FlipAngle":130, -"RepetitionTimePreparation":4.95, -"IntendedFor":"perf/sub-Sub103_asl.nii.gz"} \ No newline at end of file +{ + "Manufacturer": "Siemens", + "ManufacturersModelName": "Prisma_fit", + "SoftwareVersions": "syngo_MR_E11", + "MagneticFieldStrength": 3, + "ReceiveCoilName": "HeadNeck_64", + "ReceiveCoilActiveElements": "HC1-6", + "MRAcquisitionType": "3D", + "PulseSequenceType": "3Dgrase", + "ScanningSequence": "EP", + "SequenceVariant": "SK", + "ScanOptions": "SAT1_FS", + "SequenceName": "tg818I3d1_6720", + "PulseSequenceDetails": "Siemens 3D GRASE product sequence (WIP): tgse_csl_818", + "PartialFourier": 1, + "EchoTime": 0.01328, + "DwellTime": 3.2e-06, + "FlipAngle": 130, + "RepetitionTimePreparation": 4.95, + "IntendedFor": "bids::sub-Sub103/perf/sub-Sub103_asl.nii.gz" +} \ No newline at end of file diff --git a/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090409/meg/sub-emptyroom_ses-20090409_task-noise_proc-sss_meg.json b/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090409/meg/sub-emptyroom_ses-20090409_task-noise_proc-sss_meg.json index a621f65c4..96433b382 100644 --- a/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090409/meg/sub-emptyroom_ses-20090409_task-noise_proc-sss_meg.json +++ b/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090409/meg/sub-emptyroom_ses-20090409_task-noise_proc-sss_meg.json @@ -3,7 +3,11 @@ "SoftwareFilters": { "SSS": { "frame": "device", - "mm": [0,0,0], + "mm": [ + 0, + 0, + 0 + ], "autobad": "", "linefreq": "50", "hpisubt": "amp", @@ -15,4 +19,4 @@ "cal": "derivatives/meg_derivatives/sss_cal.dat" } } -} +} \ No newline at end of file diff --git a/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090506/meg/sub-emptyroom_ses-20090506_task-noise_proc-sss_meg.json b/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090506/meg/sub-emptyroom_ses-20090506_task-noise_proc-sss_meg.json index fdbe6666a..066d374ff 100644 --- a/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090506/meg/sub-emptyroom_ses-20090506_task-noise_proc-sss_meg.json +++ b/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090506/meg/sub-emptyroom_ses-20090506_task-noise_proc-sss_meg.json @@ -3,7 +3,11 @@ "SoftwareFilters": { "SSS": { "frame": "device", - "mm": [0,0,0], + "mm": [ + 0, + 0, + 0 + ], "autobad": "", "linefreq": "50", "hpisubt": "amp", @@ -15,4 +19,4 @@ "cal": "derivatives/meg_derivatives/sss_cal.dat" } } -} +} \ No newline at end of file diff --git a/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090511/meg/sub-emptyroom_ses-20090511_task-noise_proc-sss_meg.json b/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090511/meg/sub-emptyroom_ses-20090511_task-noise_proc-sss_meg.json index 765700dc1..7eaa546e2 100644 --- a/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090511/meg/sub-emptyroom_ses-20090511_task-noise_proc-sss_meg.json +++ b/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090511/meg/sub-emptyroom_ses-20090511_task-noise_proc-sss_meg.json @@ -3,7 +3,11 @@ "SoftwareFilters": { "SSS": { "frame": "device", - "mm": [0,0,0], + "mm": [ + 0, + 0, + 0 + ], "autobad": "", "linefreq": "50", "hpisubt": "amp", @@ -15,4 +19,4 @@ "cal": "derivatives/meg_derivatives/sss_cal.dat" } } -} +} \ No newline at end of file diff --git a/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090515/meg/sub-emptyroom_ses-20090515_task-noise_proc-sss_meg.json b/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090515/meg/sub-emptyroom_ses-20090515_task-noise_proc-sss_meg.json index 274efcd5a..85cbd593b 100644 --- a/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090515/meg/sub-emptyroom_ses-20090515_task-noise_proc-sss_meg.json +++ b/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090515/meg/sub-emptyroom_ses-20090515_task-noise_proc-sss_meg.json @@ -1,16 +1,20 @@ { "IntendedFor": [ - "sub-05/ses-meg/meg", - "sub-06/ses-meg/meg", - "sub-07/ses-meg/meg", - "sub-08/ses-meg/meg", - "sub-09/ses-meg/meg", - "sub-10/ses-meg/meg" - ], + "sub-05/ses-meg/meg", + "sub-06/ses-meg/meg", + "sub-07/ses-meg/meg", + "sub-08/ses-meg/meg", + "sub-09/ses-meg/meg", + "sub-10/ses-meg/meg" + ], "SoftwareFilters": { "SSS": { "frame": "device", - "mm": [0,0,0], + "mm": [ + 0, + 0, + 0 + ], "autobad": "", "linefreq": "50", "hpisubt": "amp", @@ -22,4 +26,4 @@ "cal": "derivatives/meg_derivatives/sss_cal.dat" } } -} +} \ No newline at end of file diff --git a/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090518/meg/sub-emptyroom_ses-20090518_task-noise_proc-sss_meg.json b/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090518/meg/sub-emptyroom_ses-20090518_task-noise_proc-sss_meg.json index f3dedbe2c..a323f9804 100644 --- a/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090518/meg/sub-emptyroom_ses-20090518_task-noise_proc-sss_meg.json +++ b/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090518/meg/sub-emptyroom_ses-20090518_task-noise_proc-sss_meg.json @@ -3,7 +3,11 @@ "SoftwareFilters": { "SSS": { "frame": "device", - "mm": [0,0,0], + "mm": [ + 0, + 0, + 0 + ], "autobad": "", "linefreq": "50", "hpisubt": "amp", @@ -15,4 +19,4 @@ "cal": "derivatives/meg_derivatives/sss_cal.dat" } } -} +} \ No newline at end of file diff --git a/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090601/meg/sub-emptyroom_ses-20090601_task-noise_proc-sss_meg.json b/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090601/meg/sub-emptyroom_ses-20090601_task-noise_proc-sss_meg.json index 871897117..8e054a170 100644 --- a/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090601/meg/sub-emptyroom_ses-20090601_task-noise_proc-sss_meg.json +++ b/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20090601/meg/sub-emptyroom_ses-20090601_task-noise_proc-sss_meg.json @@ -1,13 +1,17 @@ { "IntendedFor": [ - "sub-11/ses-meg/meg", - "sub-12/ses-meg/meg", - "sub-13/ses-meg/meg" - ], + "sub-11/ses-meg/meg", + "sub-12/ses-meg/meg", + "sub-13/ses-meg/meg" + ], "SoftwareFilters": { "SSS": { "frame": "device", - "mm": [0,0,0], + "mm": [ + 0, + 0, + 0 + ], "autobad": "", "linefreq": "50", "hpisubt": "amp", @@ -19,4 +23,4 @@ "cal": "derivatives/meg_derivatives/sss_cal.dat" } } -} +} \ No newline at end of file diff --git a/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20091126/meg/sub-emptyroom_ses-20091126_task-noise_proc-sss_meg.json b/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20091126/meg/sub-emptyroom_ses-20091126_task-noise_proc-sss_meg.json index 73def1a19..46c2d0f3b 100644 --- a/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20091126/meg/sub-emptyroom_ses-20091126_task-noise_proc-sss_meg.json +++ b/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20091126/meg/sub-emptyroom_ses-20091126_task-noise_proc-sss_meg.json @@ -3,7 +3,11 @@ "SoftwareFilters": { "SSS": { "frame": "device", - "mm": [0,0,0], + "mm": [ + 0, + 0, + 0 + ], "autobad": "", "linefreq": "50", "hpisubt": "amp", @@ -15,4 +19,4 @@ "cal": "derivatives/meg_derivatives/sss_cal.dat" } } -} +} \ No newline at end of file diff --git a/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20091208/meg/sub-emptyroom_ses-20091208_task-noise_proc-sss_meg.json b/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20091208/meg/sub-emptyroom_ses-20091208_task-noise_proc-sss_meg.json index 2c3e0549a..1798609ce 100644 --- a/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20091208/meg/sub-emptyroom_ses-20091208_task-noise_proc-sss_meg.json +++ b/ds000117/derivatives/meg_derivatives/sub-emptyroom/ses-20091208/meg/sub-emptyroom_ses-20091208_task-noise_proc-sss_meg.json @@ -1,12 +1,16 @@ { "IntendedFor": [ - "sub-15/ses-meg/meg", - "sub-16/ses-meg/meg" - ], + "sub-15/ses-meg/meg", + "sub-16/ses-meg/meg" + ], "SoftwareFilters": { "SSS": { "frame": "device", - "mm": [0,0,0], + "mm": [ + 0, + 0, + 0 + ], "autobad": "", "linefreq": "50", "hpisubt": "amp", @@ -18,4 +22,4 @@ "cal": "derivatives/meg_derivatives/sss_cal.dat" } } -} +} \ No newline at end of file diff --git a/ds000117/sub-01/ses-meg/meg/sub-01_ses-meg_coordsystem.json b/ds000117/sub-01/ses-meg/meg/sub-01_ses-meg_coordsystem.json index ae9228588..787f49952 100644 --- a/ds000117/sub-01/ses-meg/meg/sub-01_ses-meg_coordsystem.json +++ b/ds000117/sub-01/ses-meg/meg/sub-01_ses-meg_coordsystem.json @@ -1,32 +1,64 @@ -{ - "MEGCoordinateSystem": "ElektaNeuromag", - "MEGCoordinateUnits": "mm", - "MEGCoordinateSystemDescription": "VectorView: 102 Magnetometers, 204 Planar Gradiometers", - "EEGCoordinateSystem": "ElektaNeuromag", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "70 Easycap sites, roughly corresponding to extended 10-20 system: see http://imaging.mrc-cbu.cam.ac.uk/meg/VectorviewDescription#EEGlabels", - "DigitizedHeadPoints": "sub-01_ses-meg_headshape.pos", - "DigitizedHeadPointsCoordinateSystem": "ElektaNeuromag", - "DigitizedHeadPointsCoordinateUnits": "mm", - "DigitizedHeadPointsCoordinateSystemDescription": "Headpoints include arcs of points along front of head and around nose, as well as centre of 70 EEG electrodes spread across scalp, which also help define headshape. Beware that nose points can bias coregistration with MRI if MRI image does not include all of the nose.", - "AnatomicalLandmarkCoordinates": { - "LPA": [-71,0,0], - "RPA": [77.56,0,0], - "Nasion": [0,106.36,0] - }, - "AnatomicalLandmarkCoordinateSystem": "ElektaNeuromag", - "AnatomicalLandmarkCoordinateUnits": "mm", - "HeadCoilCoordinates": { - "coil1": [14.38,-86.02,77.84], - "coil2": [20.74,39.33,121.43], - "coil3": [63.03,70.44,43.05], - "coil4": [-68.38,-1.15,87.01000000000001], - "coil5": [-6.2,107.9,59.15] - }, - "HeadCoilCoordinateSystem": "ElektaNeuromag", - "HeadCoilCoordinateUnits": "mm", - "HeadCoilCoordinateSystemDescription": "5 HPI coils used", - "AnatomicalLandmarkCoordinateSystemDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation", - "FiducialsDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation", - "IntendedFor": "sub-01/ses-mri/anat/sub-01_ses-mri_acq-mprage_T1w.nii.gz" -} +{ + "MEGCoordinateSystem": "ElektaNeuromag", + "MEGCoordinateUnits": "mm", + "MEGCoordinateSystemDescription": "VectorView: 102 Magnetometers, 204 Planar Gradiometers", + "EEGCoordinateSystem": "ElektaNeuromag", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "70 Easycap sites, roughly corresponding to extended 10-20 system: see http://imaging.mrc-cbu.cam.ac.uk/meg/VectorviewDescription#EEGlabels", + "DigitizedHeadPoints": "sub-01_ses-meg_headshape.pos", + "DigitizedHeadPointsCoordinateSystem": "ElektaNeuromag", + "DigitizedHeadPointsCoordinateUnits": "mm", + "DigitizedHeadPointsCoordinateSystemDescription": "Headpoints include arcs of points along front of head and around nose, as well as centre of 70 EEG electrodes spread across scalp, which also help define headshape. Beware that nose points can bias coregistration with MRI if MRI image does not include all of the nose.", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -71, + 0, + 0 + ], + "RPA": [ + 77.56, + 0, + 0 + ], + "Nasion": [ + 0, + 106.36, + 0 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "ElektaNeuromag", + "AnatomicalLandmarkCoordinateUnits": "mm", + "HeadCoilCoordinates": { + "coil1": [ + 14.38, + -86.02, + 77.84 + ], + "coil2": [ + 20.74, + 39.33, + 121.43 + ], + "coil3": [ + 63.03, + 70.44, + 43.05 + ], + "coil4": [ + -68.38, + -1.15, + 87.01 + ], + "coil5": [ + -6.2, + 107.9, + 59.15 + ] + }, + "HeadCoilCoordinateSystem": "ElektaNeuromag", + "HeadCoilCoordinateUnits": "mm", + "HeadCoilCoordinateSystemDescription": "5 HPI coils used", + "AnatomicalLandmarkCoordinateSystemDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation", + "FiducialsDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation", + "IntendedFor": "sub-01/ses-mri/anat/sub-01_ses-mri_acq-mprage_T1w.nii.gz" +} \ No newline at end of file diff --git a/ds000117/sub-01/ses-mri/fmap/sub-01_ses-mri_phasediff.json b/ds000117/sub-01/ses-mri/fmap/sub-01_ses-mri_phasediff.json index 18b9322af..d1b29a214 100644 --- a/ds000117/sub-01/ses-mri/fmap/sub-01_ses-mri_phasediff.json +++ b/ds000117/sub-01/ses-mri/fmap/sub-01_ses-mri_phasediff.json @@ -1,17 +1,17 @@ -{ - "RepetitionTime": 0.4, - "EchoTime1": 0.00519, - "EchoTime2": 0.00765, - "FlipAngle": 60, - "IntendedFor": [ - "ses-mri/func/sub-01_ses-mri_task-facerecognition_run-01_bold.nii.gz", - "ses-mri/func/sub-01_ses-mri_task-facerecognition_run-02_bold.nii.gz", - "ses-mri/func/sub-01_ses-mri_task-facerecognition_run-03_bold.nii.gz", - "ses-mri/func/sub-01_ses-mri_task-facerecognition_run-04_bold.nii.gz", - "ses-mri/func/sub-01_ses-mri_task-facerecognition_run-05_bold.nii.gz", - "ses-mri/func/sub-01_ses-mri_task-facerecognition_run-06_bold.nii.gz", - "ses-mri/func/sub-01_ses-mri_task-facerecognition_run-07_bold.nii.gz", - "ses-mri/func/sub-01_ses-mri_task-facerecognition_run-08_bold.nii.gz", - "ses-mri/func/sub-01_ses-mri_task-facerecognition_run-09_bold.nii.gz" - ] -} +{ + "RepetitionTime": 0.4, + "EchoTime1": 0.00519, + "EchoTime2": 0.00765, + "FlipAngle": 60, + "IntendedFor": [ + "bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-01_bold.nii.gz", + "bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-02_bold.nii.gz", + "bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-03_bold.nii.gz", + "bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-04_bold.nii.gz", + "bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-05_bold.nii.gz", + "bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-06_bold.nii.gz", + "bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-07_bold.nii.gz", + "bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-08_bold.nii.gz", + "bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-09_bold.nii.gz" + ] +} \ No newline at end of file diff --git a/ds000117/sub-02/ses-meg/meg/sub-02_ses-meg_coordsystem.json b/ds000117/sub-02/ses-meg/meg/sub-02_ses-meg_coordsystem.json index b8a9859ad..d1cff5cb8 100644 --- a/ds000117/sub-02/ses-meg/meg/sub-02_ses-meg_coordsystem.json +++ b/ds000117/sub-02/ses-meg/meg/sub-02_ses-meg_coordsystem.json @@ -1,32 +1,64 @@ -{ - "MEGCoordinateSystem": "ElektaNeuromag", - "MEGCoordinateUnits": "mm", - "MEGCoordinateSystemDescription": "VectorView: 102 Magnetometers, 204 Planar Gradiometers", - "EEGCoordinateSystem": "ElektaNeuromag", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "70 Easycap sites, roughly corresponding to extended 10-20 system: see http://imaging.mrc-cbu.cam.ac.uk/meg/VectorviewDescription#EEGlabels", - "DigitizedHeadPoints": "sub-02_ses-meg_headshape.pos", - "DigitizedHeadPointsCoordinateSystem": "ElektaNeuromag", - "DigitizedHeadPointsCoordinateUnits": "mm", - "DigitizedHeadPointsCoordinateSystemDescription": "Headpoints include arcs of points along front of head and around nose, as well as centre of 70 EEG electrodes spread across scalp, which also help define headshape. Beware that nose points can bias coregistration with MRI if MRI image does not include all of the nose.", - "IntendedFor": "sub-02/ses-mri/anat/sub-02_ses-mri_acq-mprage_T1w.nii.gz", - "AnatomicalLandmarkCoordinates": { - "LPA": [-69.66,0,0], - "RPA": [71.69,0,0], - "Nasion": [0,102.82,0] - }, - "AnatomicalLandmarkCoordinateSystem": "ElektaNeuromag", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation", - "HeadCoilCoordinates": { - "coil1": [71.23249,13.62723,91.294631], - "coil2": [16.225291,-85.930645,74.58901400000001], - "coil3": [-15.709732,-7.188886,132.537663], - "coil4": [-12.606272,86.735755,93.681544], - "coil5": [-71.436286,-2.527088,90.64806299999999] - }, - "HeadCoilCoordinateSystem": "ElektaNeuromag", - "HeadCoilCoordinateUnits": "mm", - "HeadCoilCoordinateSystemDescription": "5 HPI coils used", - "FiducialsDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation" -} +{ + "MEGCoordinateSystem": "ElektaNeuromag", + "MEGCoordinateUnits": "mm", + "MEGCoordinateSystemDescription": "VectorView: 102 Magnetometers, 204 Planar Gradiometers", + "EEGCoordinateSystem": "ElektaNeuromag", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "70 Easycap sites, roughly corresponding to extended 10-20 system: see http://imaging.mrc-cbu.cam.ac.uk/meg/VectorviewDescription#EEGlabels", + "DigitizedHeadPoints": "sub-02_ses-meg_headshape.pos", + "DigitizedHeadPointsCoordinateSystem": "ElektaNeuromag", + "DigitizedHeadPointsCoordinateUnits": "mm", + "DigitizedHeadPointsCoordinateSystemDescription": "Headpoints include arcs of points along front of head and around nose, as well as centre of 70 EEG electrodes spread across scalp, which also help define headshape. Beware that nose points can bias coregistration with MRI if MRI image does not include all of the nose.", + "IntendedFor": "sub-02/ses-mri/anat/sub-02_ses-mri_acq-mprage_T1w.nii.gz", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -69.66, + 0, + 0 + ], + "RPA": [ + 71.69, + 0, + 0 + ], + "Nasion": [ + 0, + 102.82, + 0 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "ElektaNeuromag", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation", + "HeadCoilCoordinates": { + "coil1": [ + 71.23249, + 13.62723, + 91.294631 + ], + "coil2": [ + 16.225291, + -85.930645, + 74.589014 + ], + "coil3": [ + -15.709732, + -7.188886, + 132.537663 + ], + "coil4": [ + -12.606272, + 86.735755, + 93.681544 + ], + "coil5": [ + -71.436286, + -2.527088, + 90.648063 + ] + }, + "HeadCoilCoordinateSystem": "ElektaNeuromag", + "HeadCoilCoordinateUnits": "mm", + "HeadCoilCoordinateSystemDescription": "5 HPI coils used", + "FiducialsDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation" +} \ No newline at end of file diff --git a/ds000117/sub-02/ses-mri/fmap/sub-02_ses-mri_phasediff.json b/ds000117/sub-02/ses-mri/fmap/sub-02_ses-mri_phasediff.json index 0fcd8757e..c5c32c291 100644 --- a/ds000117/sub-02/ses-mri/fmap/sub-02_ses-mri_phasediff.json +++ b/ds000117/sub-02/ses-mri/fmap/sub-02_ses-mri_phasediff.json @@ -1,17 +1,17 @@ -{ - "RepetitionTime": 0.4, - "EchoTime1": 0.00519, - "EchoTime2": 0.00765, - "FlipAngle": 60, - "IntendedFor": [ - "ses-mri/func/sub-02_ses-mri_task-facerecognition_run-01_bold.nii.gz", - "ses-mri/func/sub-02_ses-mri_task-facerecognition_run-02_bold.nii.gz", - "ses-mri/func/sub-02_ses-mri_task-facerecognition_run-03_bold.nii.gz", - "ses-mri/func/sub-02_ses-mri_task-facerecognition_run-04_bold.nii.gz", - "ses-mri/func/sub-02_ses-mri_task-facerecognition_run-05_bold.nii.gz", - "ses-mri/func/sub-02_ses-mri_task-facerecognition_run-06_bold.nii.gz", - "ses-mri/func/sub-02_ses-mri_task-facerecognition_run-07_bold.nii.gz", - "ses-mri/func/sub-02_ses-mri_task-facerecognition_run-08_bold.nii.gz", - "ses-mri/func/sub-02_ses-mri_task-facerecognition_run-09_bold.nii.gz" - ] -} +{ + "RepetitionTime": 0.4, + "EchoTime1": 0.00519, + "EchoTime2": 0.00765, + "FlipAngle": 60, + "IntendedFor": [ + "bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-01_bold.nii.gz", + "bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-02_bold.nii.gz", + "bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-03_bold.nii.gz", + "bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-04_bold.nii.gz", + "bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-05_bold.nii.gz", + "bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-06_bold.nii.gz", + "bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-07_bold.nii.gz", + "bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-08_bold.nii.gz", + "bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-09_bold.nii.gz" + ] +} \ No newline at end of file diff --git a/ds000117/sub-03/ses-meg/meg/sub-03_ses-meg_coordsystem.json b/ds000117/sub-03/ses-meg/meg/sub-03_ses-meg_coordsystem.json index 65b137ba6..a9477d519 100644 --- a/ds000117/sub-03/ses-meg/meg/sub-03_ses-meg_coordsystem.json +++ b/ds000117/sub-03/ses-meg/meg/sub-03_ses-meg_coordsystem.json @@ -1,32 +1,64 @@ -{ - "MEGCoordinateSystem": "ElektaNeuromag", - "MEGCoordinateUnits": "mm", - "MEGCoordinateSystemDescription": "VectorView: 102 Magnetometers, 204 Planar Gradiometers", - "EEGCoordinateSystem": "ElektaNeuromag", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "70 Easycap sites, roughly corresponding to extended 10-20 system: see http://imaging.mrc-cbu.cam.ac.uk/meg/VectorviewDescription#EEGlabels", - "DigitizedHeadPoints": "sub-03_ses-meg_headshape.pos", - "DigitizedHeadPointsCoordinateSystem": "ElektaNeuromag", - "DigitizedHeadPointsCoordinateUnits": "mm", - "DigitizedHeadPointsCoordinateSystemDescription": "Headpoints include arcs of points along front of head and around nose, as well as centre of 70 EEG electrodes spread across scalp, which also help define headshape. Beware that nose points can bias coregistration with MRI if MRI image does not include all of the nose.", - "IntendedFor": "sub-03/ses-mri/anat/sub-03_ses-mri_acq-mprage_T1w.nii.gz", - "AnatomicalLandmarkCoordinates": { - "LPA": [-72.22,0,0], - "RPA": [73.09,0,0], - "Nasion": [0,103.36,0] - }, - "AnatomicalLandmarkCoordinateSystem": "ElektaNeuromag", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation", - "HeadCoilCoordinates": { - "coil1": [65.342471,53.080231,85.634947], - "coil2": [11.447336,112.851411,49.127419], - "coil3": [-26.197823,12.873024,132.480085], - "coil4": [7.265404,-71.17334,85.38489800000001], - "coil5": [-74.338607,8.732499000000001,83.603069] - }, - "HeadCoilCoordinateSystem": "ElektaNeuromag", - "HeadCoilCoordinateUnits": "mm", - "HeadCoilCoordinateSystemDescription": "5 HPI coils used", - "FiducialsDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation" -} +{ + "MEGCoordinateSystem": "ElektaNeuromag", + "MEGCoordinateUnits": "mm", + "MEGCoordinateSystemDescription": "VectorView: 102 Magnetometers, 204 Planar Gradiometers", + "EEGCoordinateSystem": "ElektaNeuromag", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "70 Easycap sites, roughly corresponding to extended 10-20 system: see http://imaging.mrc-cbu.cam.ac.uk/meg/VectorviewDescription#EEGlabels", + "DigitizedHeadPoints": "sub-03_ses-meg_headshape.pos", + "DigitizedHeadPointsCoordinateSystem": "ElektaNeuromag", + "DigitizedHeadPointsCoordinateUnits": "mm", + "DigitizedHeadPointsCoordinateSystemDescription": "Headpoints include arcs of points along front of head and around nose, as well as centre of 70 EEG electrodes spread across scalp, which also help define headshape. Beware that nose points can bias coregistration with MRI if MRI image does not include all of the nose.", + "IntendedFor": "sub-03/ses-mri/anat/sub-03_ses-mri_acq-mprage_T1w.nii.gz", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -72.22, + 0, + 0 + ], + "RPA": [ + 73.09, + 0, + 0 + ], + "Nasion": [ + 0, + 103.36, + 0 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "ElektaNeuromag", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation", + "HeadCoilCoordinates": { + "coil1": [ + 65.342471, + 53.080231, + 85.634947 + ], + "coil2": [ + 11.447336, + 112.851411, + 49.127419 + ], + "coil3": [ + -26.197823, + 12.873024, + 132.480085 + ], + "coil4": [ + 7.265404, + -71.17334, + 85.384898 + ], + "coil5": [ + -74.338607, + 8.732499, + 83.603069 + ] + }, + "HeadCoilCoordinateSystem": "ElektaNeuromag", + "HeadCoilCoordinateUnits": "mm", + "HeadCoilCoordinateSystemDescription": "5 HPI coils used", + "FiducialsDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation" +} \ No newline at end of file diff --git a/ds000117/sub-03/ses-mri/fmap/sub-03_ses-mri_phasediff.json b/ds000117/sub-03/ses-mri/fmap/sub-03_ses-mri_phasediff.json index 8b5a8646f..9398f3b63 100644 --- a/ds000117/sub-03/ses-mri/fmap/sub-03_ses-mri_phasediff.json +++ b/ds000117/sub-03/ses-mri/fmap/sub-03_ses-mri_phasediff.json @@ -1,17 +1,17 @@ -{ - "RepetitionTime": 0.4, - "EchoTime1": 0.00519, - "EchoTime2": 0.00765, - "FlipAngle": 60, - "IntendedFor": [ - "ses-mri/func/sub-03_ses-mri_task-facerecognition_run-01_bold.nii.gz", - "ses-mri/func/sub-03_ses-mri_task-facerecognition_run-02_bold.nii.gz", - "ses-mri/func/sub-03_ses-mri_task-facerecognition_run-03_bold.nii.gz", - "ses-mri/func/sub-03_ses-mri_task-facerecognition_run-04_bold.nii.gz", - "ses-mri/func/sub-03_ses-mri_task-facerecognition_run-05_bold.nii.gz", - "ses-mri/func/sub-03_ses-mri_task-facerecognition_run-06_bold.nii.gz", - "ses-mri/func/sub-03_ses-mri_task-facerecognition_run-07_bold.nii.gz", - "ses-mri/func/sub-03_ses-mri_task-facerecognition_run-08_bold.nii.gz", - "ses-mri/func/sub-03_ses-mri_task-facerecognition_run-09_bold.nii.gz" - ] -} +{ + "RepetitionTime": 0.4, + "EchoTime1": 0.00519, + "EchoTime2": 0.00765, + "FlipAngle": 60, + "IntendedFor": [ + "bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-01_bold.nii.gz", + "bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-02_bold.nii.gz", + "bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-03_bold.nii.gz", + "bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-04_bold.nii.gz", + "bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-05_bold.nii.gz", + "bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-06_bold.nii.gz", + "bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-07_bold.nii.gz", + "bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-08_bold.nii.gz", + "bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-09_bold.nii.gz" + ] +} \ No newline at end of file diff --git a/ds000117/sub-04/ses-meg/meg/sub-04_ses-meg_coordsystem.json b/ds000117/sub-04/ses-meg/meg/sub-04_ses-meg_coordsystem.json index f34134af9..d57a6e93a 100644 --- a/ds000117/sub-04/ses-meg/meg/sub-04_ses-meg_coordsystem.json +++ b/ds000117/sub-04/ses-meg/meg/sub-04_ses-meg_coordsystem.json @@ -1,32 +1,64 @@ -{ - "MEGCoordinateSystem": "ElektaNeuromag", - "MEGCoordinateUnits": "mm", - "MEGCoordinateSystemDescription": "VectorView: 102 Magnetometers, 204 Planar Gradiometers", - "EEGCoordinateSystem": "ElektaNeuromag", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "70 Easycap sites, roughly corresponding to extended 10-20 system: see http://imaging.mrc-cbu.cam.ac.uk/meg/VectorviewDescription#EEGlabels", - "DigitizedHeadPoints": "sub-04_ses-meg_headshape.pos", - "DigitizedHeadPointsCoordinateSystem": "ElektaNeuromag", - "DigitizedHeadPointsCoordinateUnits": "mm", - "DigitizedHeadPointsCoordinateSystemDescription": "Headpoints include arcs of points along front of head and around nose, as well as centre of 70 EEG electrodes spread across scalp, which also help define headshape. 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Beware that nose points can bias coregistration with MRI if MRI image does not include all of the nose.", + "IntendedFor": "sub-14/ses-mri/anat/sub-14_ses-mri_acq-mprage_T1w.nii.gz", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -64.84, + 0, + 0 + ], + "RPA": [ + 68.53, + 0, + 0 + ], + "Nasion": [ + 0, + 95.18, + 0 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "ElektaNeuromag", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation", + "HeadCoilCoordinates": { + "coil1": [ + 16.802274, + 92.591077, + 64.022787 + ], + "coil2": [ + 65.25749, + 28.023511, + 85.124686 + ], + "coil3": [ + 15.96087, + -73.854014, + 97.597733 + ], + "coil4": [ + -8.839432, + 24.243265, + 123.167321 + ], + "coil5": [ + -61.167873, + -5.739406, + 96.478961 + ] + }, + "HeadCoilCoordinateSystem": "ElektaNeuromag", + "HeadCoilCoordinateUnits": "mm", + "HeadCoilCoordinateSystemDescription": "5 HPI coils used", + "FiducialsDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation" +} \ No newline at end of file diff --git a/ds000117/sub-14/ses-mri/fmap/sub-14_ses-mri_phasediff.json b/ds000117/sub-14/ses-mri/fmap/sub-14_ses-mri_phasediff.json index 4b6d9ee33..63e6d8288 100644 --- a/ds000117/sub-14/ses-mri/fmap/sub-14_ses-mri_phasediff.json +++ b/ds000117/sub-14/ses-mri/fmap/sub-14_ses-mri_phasediff.json @@ -1,17 +1,17 @@ -{ - "RepetitionTime": 0.4, - "EchoTime1": 0.00519, - "EchoTime2": 0.00765, - "FlipAngle": 60, - "IntendedFor": [ - "ses-mri/func/sub-14_ses-mri_task-facerecognition_run-01_bold.nii.gz", - "ses-mri/func/sub-14_ses-mri_task-facerecognition_run-02_bold.nii.gz", - "ses-mri/func/sub-14_ses-mri_task-facerecognition_run-03_bold.nii.gz", - "ses-mri/func/sub-14_ses-mri_task-facerecognition_run-04_bold.nii.gz", - "ses-mri/func/sub-14_ses-mri_task-facerecognition_run-05_bold.nii.gz", - "ses-mri/func/sub-14_ses-mri_task-facerecognition_run-06_bold.nii.gz", - "ses-mri/func/sub-14_ses-mri_task-facerecognition_run-07_bold.nii.gz", - "ses-mri/func/sub-14_ses-mri_task-facerecognition_run-08_bold.nii.gz", - "ses-mri/func/sub-14_ses-mri_task-facerecognition_run-09_bold.nii.gz" - ] -} +{ + "RepetitionTime": 0.4, + "EchoTime1": 0.00519, + "EchoTime2": 0.00765, + "FlipAngle": 60, + "IntendedFor": [ + "bids::sub-14/ses-mri/func/sub-14_ses-mri_task-facerecognition_run-01_bold.nii.gz", + "bids::sub-14/ses-mri/func/sub-14_ses-mri_task-facerecognition_run-02_bold.nii.gz", + "bids::sub-14/ses-mri/func/sub-14_ses-mri_task-facerecognition_run-03_bold.nii.gz", + "bids::sub-14/ses-mri/func/sub-14_ses-mri_task-facerecognition_run-04_bold.nii.gz", + "bids::sub-14/ses-mri/func/sub-14_ses-mri_task-facerecognition_run-05_bold.nii.gz", + "bids::sub-14/ses-mri/func/sub-14_ses-mri_task-facerecognition_run-06_bold.nii.gz", + "bids::sub-14/ses-mri/func/sub-14_ses-mri_task-facerecognition_run-07_bold.nii.gz", + "bids::sub-14/ses-mri/func/sub-14_ses-mri_task-facerecognition_run-08_bold.nii.gz", + "bids::sub-14/ses-mri/func/sub-14_ses-mri_task-facerecognition_run-09_bold.nii.gz" + ] +} \ No newline at end of file diff --git a/ds000117/sub-15/ses-meg/meg/sub-15_ses-meg_coordsystem.json b/ds000117/sub-15/ses-meg/meg/sub-15_ses-meg_coordsystem.json index de1cc3259..69675c1c3 100644 --- a/ds000117/sub-15/ses-meg/meg/sub-15_ses-meg_coordsystem.json +++ b/ds000117/sub-15/ses-meg/meg/sub-15_ses-meg_coordsystem.json @@ -1,32 +1,64 @@ -{ - "MEGCoordinateSystem": "ElektaNeuromag", - "MEGCoordinateUnits": "mm", - "MEGCoordinateSystemDescription": "VectorView: 102 Magnetometers, 204 Planar Gradiometers", - "EEGCoordinateSystem": "ElektaNeuromag", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "70 Easycap sites, roughly corresponding to extended 10-20 system: see http://imaging.mrc-cbu.cam.ac.uk/meg/VectorviewDescription#EEGlabels", - "DigitizedHeadPoints": "sub-15_ses-meg_headshape.pos", - "DigitizedHeadPointsCoordinateSystem": "ElektaNeuromag", - "DigitizedHeadPointsCoordinateUnits": "mm", - "DigitizedHeadPointsCoordinateSystemDescription": "Headpoints include arcs of points along front of head and around nose, as well as centre of 70 EEG electrodes spread across scalp, which also help define headshape. 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Beware that nose points can bias coregistration with MRI if MRI image does not include all of the nose.", + "IntendedFor": "sub-15/ses-mri/anat/sub-15_ses-mri_acq-mprage_T1w.nii.gz", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -77.26, + 0, + 0 + ], + "RPA": [ + 77.78, + 0, + 0 + ], + "Nasion": [ + 0, + 104.09, + 0 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "ElektaNeuromag", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation", + "HeadCoilCoordinates": { + "coil1": [ + -66.534013, + -15.463024, + 78.415252 + ], + "coil2": [ + -13.502305, + -30.059993, + 114.036031 + ], + "coil3": [ + -13.652895, + 27.712643, + 114.253022 + ], + "coil4": [ + 62.118061, + 28.602811, + 76.765284 + ], + "coil5": [ + 15.269622, + 96.659064, + 62.691376 + ] + }, + "HeadCoilCoordinateSystem": "ElektaNeuromag", + "HeadCoilCoordinateUnits": "mm", + "HeadCoilCoordinateSystemDescription": "5 HPI coils used", + "FiducialsDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation" +} \ No newline at end of file diff --git a/ds000117/sub-15/ses-mri/fmap/sub-15_ses-mri_phasediff.json b/ds000117/sub-15/ses-mri/fmap/sub-15_ses-mri_phasediff.json index 2e691d409..4c297e303 100644 --- a/ds000117/sub-15/ses-mri/fmap/sub-15_ses-mri_phasediff.json +++ b/ds000117/sub-15/ses-mri/fmap/sub-15_ses-mri_phasediff.json @@ -1,17 +1,17 @@ -{ - "RepetitionTime": 0.4, - "EchoTime1": 0.00519, - "EchoTime2": 0.00765, - "FlipAngle": 60, - "IntendedFor": [ - "ses-mri/func/sub-15_ses-mri_task-facerecognition_run-01_bold.nii.gz", - "ses-mri/func/sub-15_ses-mri_task-facerecognition_run-02_bold.nii.gz", - "ses-mri/func/sub-15_ses-mri_task-facerecognition_run-03_bold.nii.gz", - "ses-mri/func/sub-15_ses-mri_task-facerecognition_run-04_bold.nii.gz", - "ses-mri/func/sub-15_ses-mri_task-facerecognition_run-05_bold.nii.gz", - "ses-mri/func/sub-15_ses-mri_task-facerecognition_run-06_bold.nii.gz", - "ses-mri/func/sub-15_ses-mri_task-facerecognition_run-07_bold.nii.gz", - "ses-mri/func/sub-15_ses-mri_task-facerecognition_run-08_bold.nii.gz", - "ses-mri/func/sub-15_ses-mri_task-facerecognition_run-09_bold.nii.gz" - ] -} +{ + "RepetitionTime": 0.4, + "EchoTime1": 0.00519, + "EchoTime2": 0.00765, + "FlipAngle": 60, + "IntendedFor": [ + "bids::sub-15/ses-mri/func/sub-15_ses-mri_task-facerecognition_run-01_bold.nii.gz", + "bids::sub-15/ses-mri/func/sub-15_ses-mri_task-facerecognition_run-02_bold.nii.gz", + "bids::sub-15/ses-mri/func/sub-15_ses-mri_task-facerecognition_run-03_bold.nii.gz", + "bids::sub-15/ses-mri/func/sub-15_ses-mri_task-facerecognition_run-04_bold.nii.gz", + "bids::sub-15/ses-mri/func/sub-15_ses-mri_task-facerecognition_run-05_bold.nii.gz", + "bids::sub-15/ses-mri/func/sub-15_ses-mri_task-facerecognition_run-06_bold.nii.gz", + "bids::sub-15/ses-mri/func/sub-15_ses-mri_task-facerecognition_run-07_bold.nii.gz", + "bids::sub-15/ses-mri/func/sub-15_ses-mri_task-facerecognition_run-08_bold.nii.gz", + "bids::sub-15/ses-mri/func/sub-15_ses-mri_task-facerecognition_run-09_bold.nii.gz" + ] +} \ No newline at end of file diff --git a/ds000117/sub-16/ses-meg/meg/sub-16_ses-meg_coordsystem.json b/ds000117/sub-16/ses-meg/meg/sub-16_ses-meg_coordsystem.json index ff2fc610f..720e4462b 100644 --- a/ds000117/sub-16/ses-meg/meg/sub-16_ses-meg_coordsystem.json +++ b/ds000117/sub-16/ses-meg/meg/sub-16_ses-meg_coordsystem.json @@ -1,32 +1,64 @@ -{ - "MEGCoordinateSystem": "ElektaNeuromag", - "MEGCoordinateUnits": "mm", - "MEGCoordinateSystemDescription": "VectorView: 102 Magnetometers, 204 Planar Gradiometers", - "EEGCoordinateSystem": "ElektaNeuromag", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "70 Easycap sites, roughly corresponding to extended 10-20 system: see http://imaging.mrc-cbu.cam.ac.uk/meg/VectorviewDescription#EEGlabels", - "DigitizedHeadPoints": "sub-16_ses-meg_headshape.pos", - "DigitizedHeadPointsCoordinateSystem": "ElektaNeuromag", - "DigitizedHeadPointsCoordinateUnits": "mm", - "DigitizedHeadPointsCoordinateSystemDescription": "Headpoints include arcs of points along front of head and around nose, as well as centre of 70 EEG electrodes spread across scalp, which also help define headshape. 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Beware that nose points can bias coregistration with MRI if MRI image does not include all of the nose.", + "IntendedFor": "sub-16/ses-mri/anat/sub-16_ses-mri_acq-mprage_T1w.nii.gz", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -72.42, + 0, + 0 + ], + "RPA": [ + 77.79, + 0, + 0 + ], + "Nasion": [ + 0, + 103.53, + 0 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "ElektaNeuromag", + "AnatomicalLandmarkCoordinateUnits": "mm", + "HeadCoilCoordinates": { + "coil1": [ + 22.74, + -99.39, + 84.36 + ], + "coil2": [ + 79.03, + 12.78, + 105.32 + ], + "coil3": [ + -13.07, + -13.13, + 142.86 + ], + "coil4": [ + -69.6, + -13.13, + 105.5 + ], + "coil5": [ + 14.67, + 88.17, + 107.43 + ] + }, + "HeadCoilCoordinateSystem": "ElektaNeuromag", + "HeadCoilCoordinateUnits": "mm", + "HeadCoilCoordinateSystemDescription": "5 HPI coils used", + "AnatomicalLandmarkCoordinateSystemDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation", + "FiducialsDescription": "For images of anatomical landmarks, see http://imaging.mrc-cbu.cam.ac.uk/meg/SubjectPreparation" +} \ No newline at end of file diff --git a/ds000117/sub-16/ses-mri/fmap/sub-16_ses-mri_phasediff.json b/ds000117/sub-16/ses-mri/fmap/sub-16_ses-mri_phasediff.json index 9a422b4e4..4b324b4fe 100644 --- a/ds000117/sub-16/ses-mri/fmap/sub-16_ses-mri_phasediff.json +++ b/ds000117/sub-16/ses-mri/fmap/sub-16_ses-mri_phasediff.json @@ -1,17 +1,17 @@ -{ - "RepetitionTime": 0.4, - "EchoTime1": 0.00519, - "EchoTime2": 0.00765, - "FlipAngle": 60, - "IntendedFor": [ - "ses-mri/func/sub-16_ses-mri_task-facerecognition_run-01_bold.nii.gz", - "ses-mri/func/sub-16_ses-mri_task-facerecognition_run-02_bold.nii.gz", - "ses-mri/func/sub-16_ses-mri_task-facerecognition_run-03_bold.nii.gz", - "ses-mri/func/sub-16_ses-mri_task-facerecognition_run-04_bold.nii.gz", - "ses-mri/func/sub-16_ses-mri_task-facerecognition_run-05_bold.nii.gz", - 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"bids::sub-16/ses-mri/func/sub-16_ses-mri_task-facerecognition_run-07_bold.nii.gz", + "bids::sub-16/ses-mri/func/sub-16_ses-mri_task-facerecognition_run-08_bold.nii.gz", + "bids::sub-16/ses-mri/func/sub-16_ses-mri_task-facerecognition_run-09_bold.nii.gz" + ] +} \ No newline at end of file diff --git a/ds000246/sub-0001/meg/sub-0001_coordsystem.json b/ds000246/sub-0001/meg/sub-0001_coordsystem.json index 7c53d5374..866f3ba64 100644 --- a/ds000246/sub-0001/meg/sub-0001_coordsystem.json +++ b/ds000246/sub-0001/meg/sub-0001_coordsystem.json @@ -1,25 +1,53 @@ -{"MEGCoordinateSystem":"CTF", -"MEGCoordinateUnits":"cm", -"MEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", -"EEGCoordinateSystem":"CTF", -"EEGCoordinateUnits":"cm", -"EEGCoordinateSystemDescription":"The 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the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "EEGCoordinateSystem": "CTF", + "EEGCoordinateUnits": "cm", + "EEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "IntendedFor": "ds000246_R1.0.0/sub-0001/anat/sub-0001_T1w.nii.gz", + "HeadCoilCoordinates": { + "coil1": [ + 10.61095674, + -0.01532629, + -0.00407281 + ], + "coil2": [ + 0.2701708, + 6.81335558, + 0.0013436 + ], + "coil3": [ + -0.24057827, + -6.78962736, + 8.921e-05 + ] + }, + "HeadCoilCoordinateSystem": "CTF", + "HeadCoilCoordinateUnits": "cm", + "HeadCoilCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "AnatomicalLandmarkCoordinates": { + "NAS": [ + 9.76823213, + -0.11917776, + -1.87417223 + ], + "LPA": [ + -0.29274026, + 6.88415084, + 0.70120923 + ], + "RPA": [ + -0.99183277, + -6.70128616, + 0.08443862 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "CTF", + "AnatomicalLandmarkCoordinateUnits": "cm", + "AnatomicalLandmarkCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "DigitizedHeadPoints": "ds000246_R1.0.0/sub-0001/meg/sub-0001_headshape.pos", + "DigitizedHeadPointsCoordinateSystem": "CTF", + "DigitizedHeadPointsCoordinateUnits": "cm", + "DigitizedHeadPointsCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y" +} \ No newline at end of file diff --git a/ds000247/sub-0002/ses-0001/meg/sub-0002_ses-0001_coordsystem.json b/ds000247/sub-0002/ses-0001/meg/sub-0002_ses-0001_coordsystem.json index 98b716e77..25704306c 100644 --- a/ds000247/sub-0002/ses-0001/meg/sub-0002_ses-0001_coordsystem.json +++ b/ds000247/sub-0002/ses-0001/meg/sub-0002_ses-0001_coordsystem.json @@ -1,33 +1,33 @@ { - "MEGCoordinateSystem": "CTF", - "MEGCoordinateUnits": "cm", - "MEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", - "EEGCoordinateSystem": "CTF", - "EEGCoordinateUnits": "cm", - "EEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", - "IntendedFor": "/sub-0002/ses-0001/anat/sub-0002_ses-0001_T1w.nii.gz", - "HeadCoilCoordinates": { - "coil1": [ - 9.56534852, - -0.02049955, - 0.02450495 - ], - "coil2": [ - -0.05239806, - 6.99865792, - -0.02399622 - ], - "coil3": [ - 0.08603075, - -6.93959265, - -0.0391808 - ] - }, - "HeadCoilCoordinateSystem": "CTF", - "HeadCoilCoordinateUnits": "cm", - "HeadCoilCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", - "DigitizedHeadPoints": "/sub-0002/ses-0001/meg/sub-0002_ses-0001_task-rest_run-01_headshape.pos", - "DigitizedHeadPointsCoordinateSystem": "CTF", - "DigitizedHeadPointsCoordinateUnits": "cm", - "DigitizedHeadPointsCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y" -} + "MEGCoordinateSystem": "CTF", + "MEGCoordinateUnits": "cm", + "MEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "EEGCoordinateSystem": "CTF", + "EEGCoordinateUnits": "cm", + "EEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "IntendedFor": "/sub-0002/ses-0001/anat/sub-0002_ses-0001_T1w.nii.gz", + "HeadCoilCoordinates": { + "coil1": [ + 9.56534852, + -0.02049955, + 0.02450495 + ], + "coil2": [ + -0.05239806, + 6.99865792, + -0.02399622 + ], + "coil3": [ + 0.08603075, + -6.93959265, + -0.0391808 + ] + }, + "HeadCoilCoordinateSystem": "CTF", + "HeadCoilCoordinateUnits": "cm", + "HeadCoilCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "DigitizedHeadPoints": "/sub-0002/ses-0001/meg/sub-0002_ses-0001_task-rest_run-01_headshape.pos", + "DigitizedHeadPointsCoordinateSystem": "CTF", + "DigitizedHeadPointsCoordinateUnits": "cm", + "DigitizedHeadPointsCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y" +} \ No newline at end of file diff --git a/ds000247/sub-0003/ses-0001/meg/sub-0003_ses-0001_coordsystem.json b/ds000247/sub-0003/ses-0001/meg/sub-0003_ses-0001_coordsystem.json index a05a686c3..3fb5ebfd9 100644 --- a/ds000247/sub-0003/ses-0001/meg/sub-0003_ses-0001_coordsystem.json +++ b/ds000247/sub-0003/ses-0001/meg/sub-0003_ses-0001_coordsystem.json @@ -1,33 +1,33 @@ { - "MEGCoordinateSystem": "CTF", - "MEGCoordinateUnits": "cm", - "MEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", - "EEGCoordinateSystem": "CTF", - "EEGCoordinateUnits": "cm", - "EEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", - "IntendedFor": "ds000247_R1.0.0/sub-0003/ses-0001/anat/sub-0003_ses-0001_T1w.nii.gz", - "HeadCoilCoordinates": { - "coil1": [ - 8.85858694, - -0.03575081, - -0.04373216 - ], - "coil2": [ - -0.07004992, - 6.50785355, - -0.03645591 - ], - "coil3": [ - -0.09460733, - -6.50460021, - 0.07703488 - ] - }, - "HeadCoilCoordinateSystem": "CTF", - "HeadCoilCoordinateUnits": "cm", - "HeadCoilCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", - "DigitizedHeadPoints": "sub-0003/ses-0001/meg/sub-0003_ses-0001_task-rest_run-01_headshape.pos", - "DigitizedHeadPointsCoordinateSystem": "CTF", - "DigitizedHeadPointsCoordinateUnits": "cm", - "DigitizedHeadPointsCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y" + "MEGCoordinateSystem": "CTF", + "MEGCoordinateUnits": "cm", + "MEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "EEGCoordinateSystem": "CTF", + "EEGCoordinateUnits": "cm", + "EEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "IntendedFor": "ds000247_R1.0.0/sub-0003/ses-0001/anat/sub-0003_ses-0001_T1w.nii.gz", + "HeadCoilCoordinates": { + "coil1": [ + 8.85858694, + -0.03575081, + -0.04373216 + ], + "coil2": [ + -0.07004992, + 6.50785355, + -0.03645591 + ], + "coil3": [ + -0.09460733, + -6.50460021, + 0.07703488 + ] + }, + "HeadCoilCoordinateSystem": "CTF", + "HeadCoilCoordinateUnits": "cm", + "HeadCoilCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "DigitizedHeadPoints": "sub-0003/ses-0001/meg/sub-0003_ses-0001_task-rest_run-01_headshape.pos", + "DigitizedHeadPointsCoordinateSystem": "CTF", + "DigitizedHeadPointsCoordinateUnits": "cm", + "DigitizedHeadPointsCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y" } \ No newline at end of file diff --git a/ds000247/sub-0004/ses-0001/meg/sub-0004_ses-0001_coordsystem.json b/ds000247/sub-0004/ses-0001/meg/sub-0004_ses-0001_coordsystem.json index 5dd00f7f2..b178a8452 100644 --- a/ds000247/sub-0004/ses-0001/meg/sub-0004_ses-0001_coordsystem.json +++ b/ds000247/sub-0004/ses-0001/meg/sub-0004_ses-0001_coordsystem.json @@ -1,18 +1,33 @@ -{"MEGCoordinateSystem":"CTF", - "MEGCoordinateUnits":"cm", - "MEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", - "EEGCoordinateSystem":"CTF", - "EEGCoordinateUnits":"cm", - "EEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", - "IntendedFor":"ds000247_R1.0.0/sub-0004/ses-0001/anat/sub-0004_ses-0001_T1w.nii.gz", - "HeadCoilCoordinates":{ - "coil1":[9.83194534,-0.00051169,0.11186294], - "coil2":[-0.00611115,6.57947207,-0.10370692], - "coil3":[-0.01775799,-6.61022433,-0.00735681]}, - "HeadCoilCoordinateSystem":"CTF", - "HeadCoilCoordinateUnits":"cm", - "HeadCoilCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", - "DigitizedHeadPoints":"sub-0004/ses-0001/meg/sub-0004_ses-0001_task-rest_run-01_headshape.pos", - "DigitizedHeadPointsCoordinateSystem":"CTF", - "DigitizedHeadPointsCoordinateUnits":"cm", - "DigitizedHeadPointsCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y"} +{ + "MEGCoordinateSystem": "CTF", + "MEGCoordinateUnits": "cm", + "MEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "EEGCoordinateSystem": "CTF", + "EEGCoordinateUnits": "cm", + "EEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "IntendedFor": "ds000247_R1.0.0/sub-0004/ses-0001/anat/sub-0004_ses-0001_T1w.nii.gz", + "HeadCoilCoordinates": { + "coil1": [ + 9.83194534, + -0.00051169, + 0.11186294 + ], + "coil2": [ + -0.00611115, + 6.57947207, + -0.10370692 + ], + "coil3": [ + -0.01775799, + -6.61022433, + -0.00735681 + ] + }, + "HeadCoilCoordinateSystem": "CTF", + "HeadCoilCoordinateUnits": "cm", + "HeadCoilCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "DigitizedHeadPoints": "sub-0004/ses-0001/meg/sub-0004_ses-0001_task-rest_run-01_headshape.pos", + "DigitizedHeadPointsCoordinateSystem": "CTF", + "DigitizedHeadPointsCoordinateUnits": "cm", + "DigitizedHeadPointsCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y" +} \ No newline at end of file diff --git a/ds000247/sub-0006/ses-0001/meg/sub-0006_ses-0001_coordsystem.json b/ds000247/sub-0006/ses-0001/meg/sub-0006_ses-0001_coordsystem.json index cb5bbaf24..5958257d5 100644 --- a/ds000247/sub-0006/ses-0001/meg/sub-0006_ses-0001_coordsystem.json +++ b/ds000247/sub-0006/ses-0001/meg/sub-0006_ses-0001_coordsystem.json @@ -1,18 +1,33 @@ -{"MEGCoordinateSystem":"CTF", - "MEGCoordinateUnits":"cm", - "MEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", - "EEGCoordinateSystem":"CTF", - "EEGCoordinateUnits":"cm", - "EEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", - "IntendedFor":"/sub-0006/ses-0001/anat/sub-0006_ses-0001_T1w.nii.gz", - "HeadCoilCoordinates":{ - "coil1":[10.35104974,-0.00501147,-0.02433402], - "coil2":[0.42711852,7.16157294,0.00237986], - "coil3":[-0.40022443,-7.17409406,0.0281395]}, - "HeadCoilCoordinateSystem":"CTF", - "HeadCoilCoordinateUnits":"cm", - "HeadCoilCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", - "DigitizedHeadPoints":"sub-0006/ses-0001/meg/sub-0006_ses-0001_task-rest_run-01_headshape.pos", - "DigitizedHeadPointsCoordinateSystem":"CTF", - "DigitizedHeadPointsCoordinateUnits":"cm", - "DigitizedHeadPointsCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y"} +{ + "MEGCoordinateSystem": "CTF", + "MEGCoordinateUnits": "cm", + "MEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "EEGCoordinateSystem": "CTF", + "EEGCoordinateUnits": "cm", + "EEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "IntendedFor": "/sub-0006/ses-0001/anat/sub-0006_ses-0001_T1w.nii.gz", + "HeadCoilCoordinates": { + "coil1": [ + 10.35104974, + -0.00501147, + -0.02433402 + ], + "coil2": [ + 0.42711852, + 7.16157294, + 0.00237986 + ], + "coil3": [ + -0.40022443, + -7.17409406, + 0.0281395 + ] + }, + "HeadCoilCoordinateSystem": "CTF", + "HeadCoilCoordinateUnits": "cm", + "HeadCoilCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "DigitizedHeadPoints": "sub-0006/ses-0001/meg/sub-0006_ses-0001_task-rest_run-01_headshape.pos", + "DigitizedHeadPointsCoordinateSystem": "CTF", + "DigitizedHeadPointsCoordinateUnits": "cm", + "DigitizedHeadPointsCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y" +} \ No newline at end of file diff --git a/ds000247/sub-0007/ses-0001/meg/sub-0007_ses-0001_coordsystem.json b/ds000247/sub-0007/ses-0001/meg/sub-0007_ses-0001_coordsystem.json index 753069846..5eea554ae 100644 --- a/ds000247/sub-0007/ses-0001/meg/sub-0007_ses-0001_coordsystem.json +++ b/ds000247/sub-0007/ses-0001/meg/sub-0007_ses-0001_coordsystem.json @@ -1,18 +1,33 @@ -{"MEGCoordinateSystem":"CTF", - "MEGCoordinateUnits":"cm", - "MEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", - "EEGCoordinateSystem":"CTF", - "EEGCoordinateUnits":"cm", - "EEGCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", - "IntendedFor":"/sub-0007/ses-0001/anat/sub-0007_ses-0001_T1w.nii.gz", - "HeadCoilCoordinates":{ - "coil1":[9.64081113,0.05215993,0.05933768], - "coil2":[-0.03473186,7.06730299,-0.07866974], - "coil3":[0.01670353,-7.12784147,-0.01598252]}, - "HeadCoilCoordinateSystem":"CTF", - "HeadCoilCoordinateUnits":"cm", - "HeadCoilCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", - "DigitizedHeadPoints":"sub-0007/ses-0001/meg/sub-0007_ses-0001_task-rest_run-01_headshape.pos", - "DigitizedHeadPointsCoordinateSystem":"CTF", - "DigitizedHeadPointsCoordinateUnits":"cm", - "DigitizedHeadPointsCoordinateSystemDescription":"The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y"} +{ + "MEGCoordinateSystem": "CTF", + "MEGCoordinateUnits": "cm", + "MEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "EEGCoordinateSystem": "CTF", + "EEGCoordinateUnits": "cm", + "EEGCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "IntendedFor": "/sub-0007/ses-0001/anat/sub-0007_ses-0001_T1w.nii.gz", + "HeadCoilCoordinates": { + "coil1": [ + 9.64081113, + 0.05215993, + 0.05933768 + ], + "coil2": [ + -0.03473186, + 7.06730299, + -0.07866974 + ], + "coil3": [ + 0.01670353, + -7.12784147, + -0.01598252 + ] + }, + "HeadCoilCoordinateSystem": "CTF", + "HeadCoilCoordinateUnits": "cm", + "HeadCoilCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y", + "DigitizedHeadPoints": "sub-0007/ses-0001/meg/sub-0007_ses-0001_task-rest_run-01_headshape.pos", + "DigitizedHeadPointsCoordinateSystem": "CTF", + "DigitizedHeadPointsCoordinateUnits": "cm", + "DigitizedHeadPointsCoordinateSystemDescription": "The origin is exactly between LPA and RPA; the X-axis goes towards NAS; the Y-axis goes approximately towards LPA, orthogonal to X and in the plane spanned by the fiducials; the Z-axis goes approximately towards the vertex, orthogonal to X and Y" +} \ No newline at end of file diff --git a/eeg_ds000117/sub-01/eeg/sub-01_coordsystem.json b/eeg_ds000117/sub-01/eeg/sub-01_coordsystem.json index 60b29a597..c8c670b88 100644 --- a/eeg_ds000117/sub-01/eeg/sub-01_coordsystem.json +++ b/eeg_ds000117/sub-01/eeg/sub-01_coordsystem.json @@ -1,14 +1,26 @@ { - "EEGCoordinateSystem": "Other", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "T1w", - "AnatomicalLandmarkCoordinates": { - "LPA": [-0.072421, -7.0961e-09, 7.7314e-09], - "NAS": [-5.772e-09, 0.10353, 4.7199e-09], - "RPA": [0.077791, -3.0159e-10, 7.8728e-09] - }, - "AnatomicalLandmarkCoordinateSystem": "Other", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "T1w", - "IntendedFor": "anat/sub-01_T1w.nii.gz" -} + "EEGCoordinateSystem": "Other", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "T1w", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -0.072421, + -7.0961e-09, + 7.7314e-09 + ], + "NAS": [ + -5.772e-09, + 0.10353, + 4.7199e-09 + ], + "RPA": [ + 0.077791, + -3.0159e-10, + 7.8728e-09 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "Other", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "T1w", + "IntendedFor": "bids::sub-01/anat/sub-01_T1w.nii.gz" +} \ No newline at end of file diff --git a/eeg_ds000117/sub-02/eeg/sub-02_coordsystem.json b/eeg_ds000117/sub-02/eeg/sub-02_coordsystem.json index 01f34cd58..b1519f1c5 100644 --- a/eeg_ds000117/sub-02/eeg/sub-02_coordsystem.json +++ b/eeg_ds000117/sub-02/eeg/sub-02_coordsystem.json @@ -1,14 +1,26 @@ { - "EEGCoordinateSystem": "Other", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "T1w", - "AnatomicalLandmarkCoordinates": { - "LPA": [-0.070999, -2.6537e-08, -6.4401e-09], - "NAS": [3.9995e-09, 0.10636, -9.817e-09], - "RPA": [0.077565, 1.5987e-08, -6.6275e-09] - }, - "AnatomicalLandmarkCoordinateSystem": "Other", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "T1w", - "IntendedFor": "anat/sub-02_T1w.nii.gz" -} + "EEGCoordinateSystem": "Other", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "T1w", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -0.070999, + -2.6537e-08, + -6.4401e-09 + ], + "NAS": [ + 3.9995e-09, + 0.10636, + -9.817e-09 + ], + "RPA": [ + 0.077565, + 1.5987e-08, + -6.6275e-09 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "Other", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "T1w", + "IntendedFor": "bids::sub-02/anat/sub-02_T1w.nii.gz" +} \ No newline at end of file diff --git a/eeg_ds000117/sub-03/eeg/sub-03_coordsystem.json b/eeg_ds000117/sub-03/eeg/sub-03_coordsystem.json index 89f105730..5de42cdac 100644 --- a/eeg_ds000117/sub-03/eeg/sub-03_coordsystem.json +++ b/eeg_ds000117/sub-03/eeg/sub-03_coordsystem.json @@ -1,14 +1,26 @@ { - "EEGCoordinateSystem": "Other", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "T1w", - "AnatomicalLandmarkCoordinates": { - "LPA": [-0.069659, 1.451e-09, -2.5793e-09], - "NAS": [-1.1001e-09, 0.10282, 6.4351e-09], - "RPA": [0.071687, -5.9466e-09, -6.3361e-09] - }, - "AnatomicalLandmarkCoordinateSystem": "Other", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "T1w", - "IntendedFor": "anat/sub-03_T1w.nii.gz" -} + "EEGCoordinateSystem": "Other", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "T1w", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -0.069659, + 1.451e-09, + -2.5793e-09 + ], + "NAS": [ + -1.1001e-09, + 0.10282, + 6.4351e-09 + ], + "RPA": [ + 0.071687, + -5.9466e-09, + -6.3361e-09 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "Other", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "T1w", + "IntendedFor": "bids::sub-03/anat/sub-03_T1w.nii.gz" +} \ No newline at end of file diff --git a/eeg_ds000117/sub-04/eeg/sub-04_coordsystem.json b/eeg_ds000117/sub-04/eeg/sub-04_coordsystem.json index 7ce272f70..d89606041 100644 --- a/eeg_ds000117/sub-04/eeg/sub-04_coordsystem.json +++ b/eeg_ds000117/sub-04/eeg/sub-04_coordsystem.json @@ -1,14 +1,26 @@ { - "EEGCoordinateSystem": "Other", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "T1w", - "AnatomicalLandmarkCoordinates": { - "LPA": [-0.072223, 1.1847e-08, 7.8273e-09], - "NAS": [-1.0052e-09, 0.10336, 8.4566e-09], - "RPA": [0.073092, 1.6933e-08, 8.8433e-09] - }, - "AnatomicalLandmarkCoordinateSystem": "Other", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "T1w", - "IntendedFor": "anat/sub-04_T1w.nii.gz" -} + "EEGCoordinateSystem": "Other", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "T1w", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -0.072223, + 1.1847e-08, + 7.8273e-09 + ], + "NAS": [ + -1.0052e-09, + 0.10336, + 8.4566e-09 + ], + "RPA": [ + 0.073092, + 1.6933e-08, + 8.8433e-09 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "Other", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "T1w", + "IntendedFor": "bids::sub-04/anat/sub-04_T1w.nii.gz" +} \ No newline at end of file diff --git a/eeg_ds000117/sub-05/eeg/sub-05_coordsystem.json b/eeg_ds000117/sub-05/eeg/sub-05_coordsystem.json index 9357fef52..1a55440b8 100644 --- a/eeg_ds000117/sub-05/eeg/sub-05_coordsystem.json +++ b/eeg_ds000117/sub-05/eeg/sub-05_coordsystem.json @@ -1,14 +1,26 @@ { - "EEGCoordinateSystem": "Other", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "T1w", - "AnatomicalLandmarkCoordinates": { - "LPA": [-0.064886, 9.4591e-09, -1.2274e-09], - "NAS": [1.5908e-09, 0.097857, -1.8505e-09], - "RPA": [0.068605, 2.9818e-09, -2.071e-09] - }, - "AnatomicalLandmarkCoordinateSystem": "Other", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "T1w", - "IntendedFor": "anat/sub-05_T1w.nii.gz" -} + "EEGCoordinateSystem": "Other", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "T1w", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -0.064886, + 9.4591e-09, + -1.2274e-09 + ], + "NAS": [ + 1.5908e-09, + 0.097857, + -1.8505e-09 + ], + "RPA": [ + 0.068605, + 2.9818e-09, + -2.071e-09 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "Other", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "T1w", + "IntendedFor": "bids::sub-05/anat/sub-05_T1w.nii.gz" +} \ No newline at end of file diff --git a/eeg_ds000117/sub-06/eeg/sub-06_coordsystem.json b/eeg_ds000117/sub-06/eeg/sub-06_coordsystem.json index 7fab03b86..825943ab7 100644 --- a/eeg_ds000117/sub-06/eeg/sub-06_coordsystem.json +++ b/eeg_ds000117/sub-06/eeg/sub-06_coordsystem.json @@ -1,14 +1,26 @@ { - "EEGCoordinateSystem": "Other", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "T1w", - "AnatomicalLandmarkCoordinates": { - "LPA": [-0.06559, 2.3605e-08, 2.773e-09], - "NAS": [-4.4034e-09, 0.095805, 2.3015e-09], - "RPA": [0.060385, 1.144e-09, 3.8683e-09] - }, - "AnatomicalLandmarkCoordinateSystem": "Other", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "T1w", - "IntendedFor": "anat/sub-06_T1w.nii.gz" -} + "EEGCoordinateSystem": "Other", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "T1w", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -0.06559, + 2.3605e-08, + 2.773e-09 + ], + "NAS": [ + -4.4034e-09, + 0.095805, + 2.3015e-09 + ], + "RPA": [ + 0.060385, + 1.144e-09, + 3.8683e-09 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "Other", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "T1w", + "IntendedFor": "bids::sub-06/anat/sub-06_T1w.nii.gz" +} \ No newline at end of file diff --git a/eeg_ds000117/sub-07/eeg/sub-07_coordsystem.json b/eeg_ds000117/sub-07/eeg/sub-07_coordsystem.json index 09bd5b8ab..94bf13c3f 100644 --- a/eeg_ds000117/sub-07/eeg/sub-07_coordsystem.json +++ b/eeg_ds000117/sub-07/eeg/sub-07_coordsystem.json @@ -1,14 +1,26 @@ { - "EEGCoordinateSystem": "Other", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "T1w", - "AnatomicalLandmarkCoordinates": { - "LPA": [-0.075958, 9.2855e-09, 1.1664e-08], - "NAS": [-6.9564e-10, 0.10076, 1.0785e-08], - "RPA": [0.073209, 6.7352e-09, 1.3187e-08] - }, - "AnatomicalLandmarkCoordinateSystem": "Other", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "T1w", - "IntendedFor": "anat/sub-07_T1w.nii.gz" -} + "EEGCoordinateSystem": "Other", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "T1w", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -0.075958, + 9.2855e-09, + 1.1664e-08 + ], + "NAS": [ + -6.9564e-10, + 0.10076, + 1.0785e-08 + ], + "RPA": [ + 0.073209, + 6.7352e-09, + 1.3187e-08 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "Other", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "T1w", + "IntendedFor": "bids::sub-07/anat/sub-07_T1w.nii.gz" +} \ No newline at end of file diff --git a/eeg_ds000117/sub-08/eeg/sub-08_coordsystem.json b/eeg_ds000117/sub-08/eeg/sub-08_coordsystem.json index 823429ec0..986be2913 100644 --- a/eeg_ds000117/sub-08/eeg/sub-08_coordsystem.json +++ b/eeg_ds000117/sub-08/eeg/sub-08_coordsystem.json @@ -1,14 +1,26 @@ { - "EEGCoordinateSystem": "Other", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "T1w", - "AnatomicalLandmarkCoordinates": { - "LPA": [-0.069813, -2.1113e-09, -2.7455e-09], - "NAS": [2.4006e-09, 0.095171, -8.327e-10], - "RPA": [0.06551, 4.0331e-09, -5.523e-10] - }, - "AnatomicalLandmarkCoordinateSystem": "Other", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "T1w", - "IntendedFor": "anat/sub-08_T1w.nii.gz" -} + "EEGCoordinateSystem": "Other", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "T1w", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -0.069813, + -2.1113e-09, + -2.7455e-09 + ], + "NAS": [ + 2.4006e-09, + 0.095171, + -8.327e-10 + ], + "RPA": [ + 0.06551, + 4.0331e-09, + -5.523e-10 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "Other", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "T1w", + "IntendedFor": "bids::sub-08/anat/sub-08_T1w.nii.gz" +} \ No newline at end of file diff --git a/eeg_ds000117/sub-09/eeg/sub-09_coordsystem.json b/eeg_ds000117/sub-09/eeg/sub-09_coordsystem.json index 57baba836..7af07ca7d 100644 --- a/eeg_ds000117/sub-09/eeg/sub-09_coordsystem.json +++ b/eeg_ds000117/sub-09/eeg/sub-09_coordsystem.json @@ -1,14 +1,26 @@ { - "EEGCoordinateSystem": "Other", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "T1w", - "AnatomicalLandmarkCoordinates": { - "LPA": [-0.069531, -2.923e-09, -3.6072e-10], - "NAS": [-4.2431e-09, 0.091441, 3.3939e-09], - "RPA": [0.069756, 2.1947e-09, -1.8416e-09] - }, - "AnatomicalLandmarkCoordinateSystem": "Other", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "T1w", - "IntendedFor": "anat/sub-09_T1w.nii.gz" -} + "EEGCoordinateSystem": "Other", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "T1w", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -0.069531, + -2.923e-09, + -3.6072e-10 + ], + "NAS": [ + -4.2431e-09, + 0.091441, + 3.3939e-09 + ], + "RPA": [ + 0.069756, + 2.1947e-09, + -1.8416e-09 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "Other", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "T1w", + "IntendedFor": "bids::sub-09/anat/sub-09_T1w.nii.gz" +} \ No newline at end of file diff --git a/eeg_ds000117/sub-10/eeg/sub-10_coordsystem.json b/eeg_ds000117/sub-10/eeg/sub-10_coordsystem.json index 4ef5e6530..15d404e00 100644 --- a/eeg_ds000117/sub-10/eeg/sub-10_coordsystem.json +++ b/eeg_ds000117/sub-10/eeg/sub-10_coordsystem.json @@ -1,14 +1,26 @@ { - "EEGCoordinateSystem": "Other", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "T1w", - "AnatomicalLandmarkCoordinates": { - "LPA": [-0.066774, -7.9189e-09, -4.9972e-10], - "NAS": [3.829e-09, 0.099563, -4.0023e-10], - "RPA": [0.070321, -7.2794e-09, -1.294e-09] - }, - "AnatomicalLandmarkCoordinateSystem": "Other", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "T1w", - "IntendedFor": "anat/sub-10_T1w.nii.gz" -} + "EEGCoordinateSystem": "Other", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "T1w", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -0.066774, + -7.9189e-09, + -4.9972e-10 + ], + "NAS": [ + 3.829e-09, + 0.099563, + -4.0023e-10 + ], + "RPA": [ + 0.070321, + -7.2794e-09, + -1.294e-09 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "Other", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "T1w", + "IntendedFor": "bids::sub-10/anat/sub-10_T1w.nii.gz" +} \ No newline at end of file diff --git a/eeg_ds000117/sub-11/eeg/sub-11_coordsystem.json b/eeg_ds000117/sub-11/eeg/sub-11_coordsystem.json index 9883faa05..d5a252977 100644 --- a/eeg_ds000117/sub-11/eeg/sub-11_coordsystem.json +++ b/eeg_ds000117/sub-11/eeg/sub-11_coordsystem.json @@ -1,14 +1,26 @@ { - "EEGCoordinateSystem": "Other", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "T1w", - "AnatomicalLandmarkCoordinates": { - "LPA": [-0.070162, 1.3948e-08, -7.516e-09], - "NAS": [-3.3847e-09, 0.092531, -4.7057e-09], - "RPA": [0.07507, -5.8792e-09, -7.8174e-09] - }, - "AnatomicalLandmarkCoordinateSystem": "Other", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "T1w", - "IntendedFor": "anat/sub-11_T1w.nii.gz" -} + "EEGCoordinateSystem": "Other", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "T1w", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -0.070162, + 1.3948e-08, + -7.516e-09 + ], + "NAS": [ + -3.3847e-09, + 0.092531, + -4.7057e-09 + ], + "RPA": [ + 0.07507, + -5.8792e-09, + -7.8174e-09 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "Other", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "T1w", + "IntendedFor": "bids::sub-11/anat/sub-11_T1w.nii.gz" +} \ No newline at end of file diff --git a/eeg_ds000117/sub-12/eeg/sub-12_coordsystem.json b/eeg_ds000117/sub-12/eeg/sub-12_coordsystem.json index bc6c9fc3a..5da57b6ee 100644 --- a/eeg_ds000117/sub-12/eeg/sub-12_coordsystem.json +++ b/eeg_ds000117/sub-12/eeg/sub-12_coordsystem.json @@ -1,14 +1,26 @@ { - "EEGCoordinateSystem": "Other", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "T1w", - "AnatomicalLandmarkCoordinates": { - "LPA": [-0.073547, 4.4318e-09, -8.692e-09], - "NAS": [-3.2459e-09, 0.10252, -3.7774e-09], - "RPA": [0.073175, -7.7225e-09, -7.4086e-09] - }, - "AnatomicalLandmarkCoordinateSystem": "Other", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "T1w", - "IntendedFor": "anat/sub-12_T1w.nii.gz" -} + "EEGCoordinateSystem": "Other", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "T1w", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -0.073547, + 4.4318e-09, + -8.692e-09 + ], + "NAS": [ + -3.2459e-09, + 0.10252, + -3.7774e-09 + ], + "RPA": [ + 0.073175, + -7.7225e-09, + -7.4086e-09 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "Other", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "T1w", + "IntendedFor": "bids::sub-12/anat/sub-12_T1w.nii.gz" +} \ No newline at end of file diff --git a/eeg_ds000117/sub-13/eeg/sub-13_coordsystem.json b/eeg_ds000117/sub-13/eeg/sub-13_coordsystem.json index d7242bea1..06b7552d1 100644 --- a/eeg_ds000117/sub-13/eeg/sub-13_coordsystem.json +++ b/eeg_ds000117/sub-13/eeg/sub-13_coordsystem.json @@ -1,14 +1,26 @@ { - "EEGCoordinateSystem": "Other", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "T1w", - "AnatomicalLandmarkCoordinates": { - "LPA": [-0.066552, 1.8215e-08, 9.3072e-09], - "NAS": [4.191e-09, 0.094646, 7.0412e-09], - "RPA": [0.066073, 1.3642e-08, 6.7989e-09] - }, - "AnatomicalLandmarkCoordinateSystem": "Other", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "T1w", - "IntendedFor": "anat/sub-13_T1w.nii.gz" -} + "EEGCoordinateSystem": "Other", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "T1w", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -0.066552, + 1.8215e-08, + 9.3072e-09 + ], + "NAS": [ + 4.191e-09, + 0.094646, + 7.0412e-09 + ], + "RPA": [ + 0.066073, + 1.3642e-08, + 6.7989e-09 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "Other", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "T1w", + "IntendedFor": "bids::sub-13/anat/sub-13_T1w.nii.gz" +} \ No newline at end of file diff --git a/eeg_ds000117/sub-14/eeg/sub-14_coordsystem.json b/eeg_ds000117/sub-14/eeg/sub-14_coordsystem.json index 3c66ab045..eb3cc97b8 100644 --- a/eeg_ds000117/sub-14/eeg/sub-14_coordsystem.json +++ b/eeg_ds000117/sub-14/eeg/sub-14_coordsystem.json @@ -1,14 +1,26 @@ { - "EEGCoordinateSystem": "Other", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "T1w", - "AnatomicalLandmarkCoordinates": { - "LPA": [-0.072041, 1.8748e-08, -7.324e-10], - "NAS": [-1.7871e-09, 0.093568, -4.061e-09], - "RPA": [0.070207, 1.5703e-08, -2.6709e-09] - }, - "AnatomicalLandmarkCoordinateSystem": "Other", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "T1w", - "IntendedFor": "anat/sub-14_T1w.nii.gz" -} + "EEGCoordinateSystem": "Other", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "T1w", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -0.072041, + 1.8748e-08, + -7.324e-10 + ], + "NAS": [ + -1.7871e-09, + 0.093568, + -4.061e-09 + ], + "RPA": [ + 0.070207, + 1.5703e-08, + -2.6709e-09 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "Other", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "T1w", + "IntendedFor": "bids::sub-14/anat/sub-14_T1w.nii.gz" +} \ No newline at end of file diff --git a/eeg_ds000117/sub-15/eeg/sub-15_coordsystem.json b/eeg_ds000117/sub-15/eeg/sub-15_coordsystem.json index 3de2b6f15..e56ab2ad0 100644 --- a/eeg_ds000117/sub-15/eeg/sub-15_coordsystem.json +++ b/eeg_ds000117/sub-15/eeg/sub-15_coordsystem.json @@ -1,14 +1,26 @@ { - "EEGCoordinateSystem": "Other", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "T1w", - "AnatomicalLandmarkCoordinates": { - "LPA": [-0.066167, 1.7358e-09, -3.8436e-09], - "NAS": [-4.105e-09, 0.090447, -4.5411e-10], - "RPA": [0.063597, -6.4352e-09, -4.5665e-09] - }, - "AnatomicalLandmarkCoordinateSystem": "Other", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "T1w", - "IntendedFor": "anat/sub-15_T1w.nii.gz" -} + "EEGCoordinateSystem": "Other", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "T1w", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -0.066167, + 1.7358e-09, + -3.8436e-09 + ], + "NAS": [ + -4.105e-09, + 0.090447, + -4.5411e-10 + ], + "RPA": [ + 0.063597, + -6.4352e-09, + -4.5665e-09 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "Other", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "T1w", + "IntendedFor": "bids::sub-15/anat/sub-15_T1w.nii.gz" +} \ No newline at end of file diff --git a/eeg_ds000117/sub-16/eeg/sub-16_coordsystem.json b/eeg_ds000117/sub-16/eeg/sub-16_coordsystem.json index c4716ab34..068ced26d 100644 --- a/eeg_ds000117/sub-16/eeg/sub-16_coordsystem.json +++ b/eeg_ds000117/sub-16/eeg/sub-16_coordsystem.json @@ -1,14 +1,26 @@ { - "EEGCoordinateSystem": "Other", - "EEGCoordinateUnits": "mm", - "EEGCoordinateSystemDescription": "T1w", - "AnatomicalLandmarkCoordinates": { - "LPA": [-0.070787, 1.6374e-09, 1.4855e-09], - "NAS": [8.0608e-09, 0.09253, 2.8132e-09], - "RPA": [0.070614, 1.3808e-08, -3.5898e-10] - }, - "AnatomicalLandmarkCoordinateSystem": "Other", - "AnatomicalLandmarkCoordinateUnits": "mm", - "AnatomicalLandmarkCoordinateSystemDescription": "T1w", - "IntendedFor": "anat/sub-16_T1w.nii.gz" -} + "EEGCoordinateSystem": "Other", + "EEGCoordinateUnits": "mm", + "EEGCoordinateSystemDescription": "T1w", + "AnatomicalLandmarkCoordinates": { + "LPA": [ + -0.070787, + 1.6374e-09, + 1.4855e-09 + ], + "NAS": [ + 8.0608e-09, + 0.09253, + 2.8132e-09 + ], + "RPA": [ + 0.070614, + 1.3808e-08, + -3.5898e-10 + ] + }, + "AnatomicalLandmarkCoordinateSystem": "Other", + "AnatomicalLandmarkCoordinateUnits": "mm", + "AnatomicalLandmarkCoordinateSystemDescription": "T1w", + "IntendedFor": "bids::sub-16/anat/sub-16_T1w.nii.gz" +} \ No newline at end of file diff --git a/hcp_example_bids/sub-100307/fmap/sub-100307_acq-forT1w_phasediff.json b/hcp_example_bids/sub-100307/fmap/sub-100307_acq-forT1w_phasediff.json index d3007f2ca..dccf8694b 100644 --- a/hcp_example_bids/sub-100307/fmap/sub-100307_acq-forT1w_phasediff.json +++ b/hcp_example_bids/sub-100307/fmap/sub-100307_acq-forT1w_phasediff.json @@ -1,5 +1,5 @@ { - "EchoTime1":0.00492, - "EchoTime2":0.00738, - "IntendedFor":"anat/sub-100307_T1w.nii.gz" -} + "EchoTime1": 0.00492, + "EchoTime2": 0.00738, + "IntendedFor": "bids::sub-100307/anat/sub-100307_T1w.nii.gz" +} \ No newline at end of file diff --git a/ieeg_epilepsy/sub-01/ses-postimp/ieeg/sub-01_ses-postimp_space-IXI549Space_coordsystem.json b/ieeg_epilepsy/sub-01/ses-postimp/ieeg/sub-01_ses-postimp_space-IXI549Space_coordsystem.json index 7e2e41447..38a47831b 100644 --- a/ieeg_epilepsy/sub-01/ses-postimp/ieeg/sub-01_ses-postimp_space-IXI549Space_coordsystem.json +++ b/ieeg_epilepsy/sub-01/ses-postimp/ieeg/sub-01_ses-postimp_space-IXI549Space_coordsystem.json @@ -1,7 +1,7 @@ { - "iEEGCoordinateSystem": "IXI549Space", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateProcessingDescription": "SEEG contacts manually placed with IntrAnat on the post-implantation T1w MRI, registered on the pre-implantation T1w, and normalized to IXI549Space with SPM12", - "iEEGCoordinateProcessingReference": "Deman, P., Bhattacharjee, M., Tadel, F., Job, A. S., Rivière, D., Cointepas, Y., Kahane, P., … David, O. (2018). IntrAnat Electrodes: A Free Database and Visualization Software for Intracranial Electroencephalographic Data Processed for Case and Group Studies. Frontiers in neuroinformatics, 12, 40. doi:10.3389/fninf.2018.00040", - "IntendedFor": "sub-01/ses-postimp/anat/sub-01_ses-postimp_T1w.nii.gz" -} + "iEEGCoordinateSystem": "IXI549Space", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateProcessingDescription": "SEEG contacts manually placed with IntrAnat on the post-implantation T1w MRI, registered on the pre-implantation T1w, and normalized to IXI549Space with SPM12", + "iEEGCoordinateProcessingReference": "Deman, P., Bhattacharjee, M., Tadel, F., Job, A. S., Rivi\u00e8re, D., Cointepas, Y., Kahane, P., \u2026 David, O. (2018). IntrAnat Electrodes: A Free Database and Visualization Software for Intracranial Electroencephalographic Data Processed for Case and Group Studies. Frontiers in neuroinformatics, 12, 40. doi:10.3389/fninf.2018.00040", + "IntendedFor": "sub-01/ses-postimp/anat/sub-01_ses-postimp_T1w.nii.gz" +} \ No newline at end of file diff --git a/ieeg_epilepsy/sub-01/ses-postimp/ieeg/sub-01_ses-postimp_space-ScanRAS_coordsystem.json b/ieeg_epilepsy/sub-01/ses-postimp/ieeg/sub-01_ses-postimp_space-ScanRAS_coordsystem.json index ee6f24a4a..e37574fe6 100644 --- a/ieeg_epilepsy/sub-01/ses-postimp/ieeg/sub-01_ses-postimp_space-ScanRAS_coordsystem.json +++ b/ieeg_epilepsy/sub-01/ses-postimp/ieeg/sub-01_ses-postimp_space-ScanRAS_coordsystem.json @@ -1,8 +1,8 @@ { - "iEEGCoordinateSystem": "ScanRAS", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Scanner-based RAS coordinates of the post-implantation T1 MRI", - "iEEGCoordinateProcessingDescription": "SEEG contacts manually placed with IntrAnat on the post-implantation T1w MRI, which was registered on the pre-implantation T1w", - "iEEGCoordinateProcessingReference": "Deman, P., Bhattacharjee, M., Tadel, F., Job, A. S., Rivière, D., Cointepas, Y., Kahane, P., … David, O. (2018). IntrAnat Electrodes: A Free Database and Visualization Software for Intracranial Electroencephalographic Data Processed for Case and Group Studies. Frontiers in neuroinformatics, 12, 40. doi:10.3389/fninf.2018.00040", - "IntendedFor": "sub-01/ses-postimp/anat/sub-01_ses-postimp_T1w.nii.gz" -} + "iEEGCoordinateSystem": "ScanRAS", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Scanner-based RAS coordinates of the post-implantation T1 MRI", + "iEEGCoordinateProcessingDescription": "SEEG contacts manually placed with IntrAnat on the post-implantation T1w MRI, which was registered on the pre-implantation T1w", + "iEEGCoordinateProcessingReference": "Deman, P., Bhattacharjee, M., Tadel, F., Job, A. S., Rivi\u00e8re, D., Cointepas, Y., Kahane, P., \u2026 David, O. (2018). IntrAnat Electrodes: A Free Database and Visualization Software for Intracranial Electroencephalographic Data Processed for Case and Group Studies. Frontiers in neuroinformatics, 12, 40. doi:10.3389/fninf.2018.00040", + "IntendedFor": "sub-01/ses-postimp/anat/sub-01_ses-postimp_T1w.nii.gz" +} \ No newline at end of file diff --git a/ieeg_epilepsyNWB/sub-01/ses-postimp/ieeg/sub-01_ses-postimp_space-IXI549Space_coordsystem.json b/ieeg_epilepsyNWB/sub-01/ses-postimp/ieeg/sub-01_ses-postimp_space-IXI549Space_coordsystem.json index 7e2e41447..38a47831b 100644 --- a/ieeg_epilepsyNWB/sub-01/ses-postimp/ieeg/sub-01_ses-postimp_space-IXI549Space_coordsystem.json +++ b/ieeg_epilepsyNWB/sub-01/ses-postimp/ieeg/sub-01_ses-postimp_space-IXI549Space_coordsystem.json @@ -1,7 +1,7 @@ { - "iEEGCoordinateSystem": "IXI549Space", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateProcessingDescription": "SEEG contacts manually placed with IntrAnat on the post-implantation T1w MRI, registered on the pre-implantation T1w, and normalized to IXI549Space with SPM12", - "iEEGCoordinateProcessingReference": "Deman, P., Bhattacharjee, M., Tadel, F., Job, A. S., Rivière, D., Cointepas, Y., Kahane, P., … David, O. (2018). IntrAnat Electrodes: A Free Database and Visualization Software for Intracranial Electroencephalographic Data Processed for Case and Group Studies. Frontiers in neuroinformatics, 12, 40. doi:10.3389/fninf.2018.00040", - "IntendedFor": "sub-01/ses-postimp/anat/sub-01_ses-postimp_T1w.nii.gz" -} + "iEEGCoordinateSystem": "IXI549Space", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateProcessingDescription": "SEEG contacts manually placed with IntrAnat on the post-implantation T1w MRI, registered on the pre-implantation T1w, and normalized to IXI549Space with SPM12", + "iEEGCoordinateProcessingReference": "Deman, P., Bhattacharjee, M., Tadel, F., Job, A. S., Rivi\u00e8re, D., Cointepas, Y., Kahane, P., \u2026 David, O. (2018). IntrAnat Electrodes: A Free Database and Visualization Software for Intracranial Electroencephalographic Data Processed for Case and Group Studies. Frontiers in neuroinformatics, 12, 40. doi:10.3389/fninf.2018.00040", + "IntendedFor": "sub-01/ses-postimp/anat/sub-01_ses-postimp_T1w.nii.gz" +} \ No newline at end of file diff --git a/ieeg_epilepsyNWB/sub-01/ses-postimp/ieeg/sub-01_ses-postimp_space-ScanRAS_coordsystem.json b/ieeg_epilepsyNWB/sub-01/ses-postimp/ieeg/sub-01_ses-postimp_space-ScanRAS_coordsystem.json index ee6f24a4a..e37574fe6 100644 --- a/ieeg_epilepsyNWB/sub-01/ses-postimp/ieeg/sub-01_ses-postimp_space-ScanRAS_coordsystem.json +++ b/ieeg_epilepsyNWB/sub-01/ses-postimp/ieeg/sub-01_ses-postimp_space-ScanRAS_coordsystem.json @@ -1,8 +1,8 @@ { - "iEEGCoordinateSystem": "ScanRAS", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Scanner-based RAS coordinates of the post-implantation T1 MRI", - "iEEGCoordinateProcessingDescription": "SEEG contacts manually placed with IntrAnat on the post-implantation T1w MRI, which was registered on the pre-implantation T1w", - "iEEGCoordinateProcessingReference": "Deman, P., Bhattacharjee, M., Tadel, F., Job, A. S., Rivière, D., Cointepas, Y., Kahane, P., … David, O. (2018). IntrAnat Electrodes: A Free Database and Visualization Software for Intracranial Electroencephalographic Data Processed for Case and Group Studies. Frontiers in neuroinformatics, 12, 40. doi:10.3389/fninf.2018.00040", - "IntendedFor": "sub-01/ses-postimp/anat/sub-01_ses-postimp_T1w.nii.gz" -} + "iEEGCoordinateSystem": "ScanRAS", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Scanner-based RAS coordinates of the post-implantation T1 MRI", + "iEEGCoordinateProcessingDescription": "SEEG contacts manually placed with IntrAnat on the post-implantation T1w MRI, which was registered on the pre-implantation T1w", + "iEEGCoordinateProcessingReference": "Deman, P., Bhattacharjee, M., Tadel, F., Job, A. S., Rivi\u00e8re, D., Cointepas, Y., Kahane, P., \u2026 David, O. (2018). IntrAnat Electrodes: A Free Database and Visualization Software for Intracranial Electroencephalographic Data Processed for Case and Group Studies. Frontiers in neuroinformatics, 12, 40. doi:10.3389/fninf.2018.00040", + "IntendedFor": "sub-01/ses-postimp/anat/sub-01_ses-postimp_T1w.nii.gz" +} \ No newline at end of file diff --git a/ieeg_filtered_speech/sub-cm4/ieeg/sub-cm4_coordsystem.json b/ieeg_filtered_speech/sub-cm4/ieeg/sub-cm4_coordsystem.json index 51301a034..80ff403d5 100644 --- a/ieeg_filtered_speech/sub-cm4/ieeg/sub-cm4_coordsystem.json +++ b/ieeg_filtered_speech/sub-cm4/ieeg/sub-cm4_coordsystem.json @@ -1,5 +1,5 @@ { - "iEEGCoordinateSystem": "Pixels", - "iEEGCoordinateUnits": "pixels", - "IntendedFor": "bids::sub-cm4/ieeg/sub-cm4_photo.jpg" -} + "iEEGCoordinateSystem": "Pixels", + "iEEGCoordinateUnits": "pixels", + "IntendedFor": "bids::sub-cm4/ieeg/sub-cm4_photo.jpg" +} \ No newline at end of file diff --git a/ieeg_filtered_speech/sub-cm8/ieeg/sub-cm8_coordsystem.json b/ieeg_filtered_speech/sub-cm8/ieeg/sub-cm8_coordsystem.json index 5c9f9e2d4..6e31fb313 100644 --- a/ieeg_filtered_speech/sub-cm8/ieeg/sub-cm8_coordsystem.json +++ b/ieeg_filtered_speech/sub-cm8/ieeg/sub-cm8_coordsystem.json @@ -1,5 +1,5 @@ { - "iEEGCoordinateSystem": "Pixels", - "iEEGCoordinateUnits": "pixels", - "IntendedFor": "bids::sub-cm8/ieeg/sub-cm8_photo.jpg" -} + "iEEGCoordinateSystem": "Pixels", + "iEEGCoordinateUnits": "pixels", + "IntendedFor": "bids::sub-cm8/ieeg/sub-cm8_photo.jpg" +} \ No newline at end of file diff --git a/ieeg_filtered_speech/sub-ir05/ieeg/sub-ir05_coordsystem.json b/ieeg_filtered_speech/sub-ir05/ieeg/sub-ir05_coordsystem.json index bed40de1c..3d436b0cd 100644 --- a/ieeg_filtered_speech/sub-ir05/ieeg/sub-ir05_coordsystem.json +++ b/ieeg_filtered_speech/sub-ir05/ieeg/sub-ir05_coordsystem.json @@ -1,5 +1,5 @@ { - "iEEGCoordinateSystem": "Pixels", - "iEEGCoordinateUnits": "pixels", - "IntendedFor": "bids::sub-ir05/ieeg/sub-ir05_photo.jpg" -} + "iEEGCoordinateSystem": "Pixels", + "iEEGCoordinateUnits": "pixels", + "IntendedFor": "bids::sub-ir05/ieeg/sub-ir05_photo.jpg" +} \ No newline at end of file diff --git a/ieeg_filtered_speech/sub-ir07/ieeg/sub-ir07_coordsystem.json b/ieeg_filtered_speech/sub-ir07/ieeg/sub-ir07_coordsystem.json index 08160fbfb..5fc53967f 100644 --- a/ieeg_filtered_speech/sub-ir07/ieeg/sub-ir07_coordsystem.json +++ b/ieeg_filtered_speech/sub-ir07/ieeg/sub-ir07_coordsystem.json @@ -1,5 +1,5 @@ { - "iEEGCoordinateSystem": "Pixels", - "iEEGCoordinateUnits": "pixels", - "IntendedFor": "bids::sub-ir07/ieeg/sub-ir07_photo.jpg" -} + "iEEGCoordinateSystem": "Pixels", + "iEEGCoordinateUnits": "pixels", + "IntendedFor": "bids::sub-ir07/ieeg/sub-ir07_photo.jpg" +} \ No newline at end of file diff --git a/ieeg_filtered_speech/sub-ir08/ieeg/sub-ir08_coordsystem.json b/ieeg_filtered_speech/sub-ir08/ieeg/sub-ir08_coordsystem.json index 08ceae234..071e2d8a4 100644 --- a/ieeg_filtered_speech/sub-ir08/ieeg/sub-ir08_coordsystem.json +++ b/ieeg_filtered_speech/sub-ir08/ieeg/sub-ir08_coordsystem.json @@ -1,5 +1,5 @@ { - "iEEGCoordinateSystem": "Pixels", - "iEEGCoordinateUnits": "pixels", - "IntendedFor": "bids::sub-ir08/ieeg/sub-ir08_photo.jpg" -} + "iEEGCoordinateSystem": "Pixels", + "iEEGCoordinateUnits": "pixels", + "IntendedFor": "bids::sub-ir08/ieeg/sub-ir08_photo.jpg" +} \ No newline at end of file diff --git a/ieeg_filtered_speech/sub-jh17/ieeg/sub-jh17_coordsystem.json b/ieeg_filtered_speech/sub-jh17/ieeg/sub-jh17_coordsystem.json index ad1f56707..f51527692 100644 --- a/ieeg_filtered_speech/sub-jh17/ieeg/sub-jh17_coordsystem.json +++ b/ieeg_filtered_speech/sub-jh17/ieeg/sub-jh17_coordsystem.json @@ -1,5 +1,5 @@ { - "iEEGCoordinateSystem": "Pixels", - "iEEGCoordinateUnits": "pixels", - "IntendedFor": "bids::sub-jh17/ieeg/sub-jh17_photo.jpg" -} + "iEEGCoordinateSystem": "Pixels", + "iEEGCoordinateUnits": "pixels", + "IntendedFor": "bids::sub-jh17/ieeg/sub-jh17_photo.jpg" +} \ No newline at end of file diff --git a/ieeg_filtered_speech/sub-jh19/ieeg/sub-jh19_coordsystem.json b/ieeg_filtered_speech/sub-jh19/ieeg/sub-jh19_coordsystem.json index 69f52593d..0991280d8 100644 --- a/ieeg_filtered_speech/sub-jh19/ieeg/sub-jh19_coordsystem.json +++ b/ieeg_filtered_speech/sub-jh19/ieeg/sub-jh19_coordsystem.json @@ -1,5 +1,5 @@ { - "iEEGCoordinateSystem": "Pixels", - "iEEGCoordinateUnits": "pixels", - "IntendedFor": "bids::sub-jh19/ieeg/sub-jh19_photo.jpg" -} + "iEEGCoordinateSystem": "Pixels", + "iEEGCoordinateUnits": "pixels", + "IntendedFor": "bids::sub-jh19/ieeg/sub-jh19_photo.jpg" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-bp/ses-01/ieeg/sub-bp_ses-01_space-ACPC_coordsystem.json b/ieeg_motorMiller2007/sub-bp/ses-01/ieeg/sub-bp_ses-01_space-ACPC_coordsystem.json index a939711c8..5ea98c6c0 100644 --- a/ieeg_motorMiller2007/sub-bp/ses-01/ieeg/sub-bp_ses-01_space-ACPC_coordsystem.json +++ b/ieeg_motorMiller2007/sub-bp/ses-01/ieeg/sub-bp_ses-01_space-ACPC_coordsystem.json @@ -1,8 +1,8 @@ { - "IntendedFor": "/derivatives/surfaces/sub-bp/ses-01/anat/sub-bp_pial.surf.gii", - "iEEGCoordinateSystem": "ACPC", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right", - "iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth", - "iEEGCoordinateProcessingDescription": "surface_projection_Hermes" -} + "IntendedFor": "/derivatives/surfaces/sub-bp/ses-01/anat/sub-bp_pial.surf.gii", + "iEEGCoordinateSystem": "ACPC", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right", + "iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth", + "iEEGCoordinateProcessingDescription": "surface_projection_Hermes" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-bp/ses-01/ieeg/sub-bp_ses-01_space-Talairach_coordsystem.json b/ieeg_motorMiller2007/sub-bp/ses-01/ieeg/sub-bp_ses-01_space-Talairach_coordsystem.json index 657219191..3ca9ed27f 100644 --- a/ieeg_motorMiller2007/sub-bp/ses-01/ieeg/sub-bp_ses-01_space-Talairach_coordsystem.json +++ b/ieeg_motorMiller2007/sub-bp/ses-01/ieeg/sub-bp_ses-01_space-Talairach_coordsystem.json @@ -1,7 +1,7 @@ { - "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", - "iEEGCoordinateSystem": "Talairach", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Talairach space RAS", - "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" -} + "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", + "iEEGCoordinateSystem": "Talairach", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Talairach space RAS", + "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-ca/ses-01/ieeg/sub-ca_ses-01_space-ACPC_coordsystem.json b/ieeg_motorMiller2007/sub-ca/ses-01/ieeg/sub-ca_ses-01_space-ACPC_coordsystem.json index cf8fdb1eb..72bec28ae 100644 --- a/ieeg_motorMiller2007/sub-ca/ses-01/ieeg/sub-ca_ses-01_space-ACPC_coordsystem.json +++ b/ieeg_motorMiller2007/sub-ca/ses-01/ieeg/sub-ca_ses-01_space-ACPC_coordsystem.json @@ -1,8 +1,8 @@ { - "IntendedFor": "/derivatives/surfaces/sub-ca/ses-01/anat/sub-ca_pial.surf.gii", - "iEEGCoordinateSystem": "ACPC", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right", - "iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth", - "iEEGCoordinateProcessingDescription": "surface_projection_Hermes" -} + "IntendedFor": "/derivatives/surfaces/sub-ca/ses-01/anat/sub-ca_pial.surf.gii", + "iEEGCoordinateSystem": "ACPC", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right", + "iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth", + "iEEGCoordinateProcessingDescription": "surface_projection_Hermes" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-ca/ses-01/ieeg/sub-ca_ses-01_space-Talairach_coordsystem.json b/ieeg_motorMiller2007/sub-ca/ses-01/ieeg/sub-ca_ses-01_space-Talairach_coordsystem.json index 657219191..3ca9ed27f 100644 --- a/ieeg_motorMiller2007/sub-ca/ses-01/ieeg/sub-ca_ses-01_space-Talairach_coordsystem.json +++ b/ieeg_motorMiller2007/sub-ca/ses-01/ieeg/sub-ca_ses-01_space-Talairach_coordsystem.json @@ -1,7 +1,7 @@ { - "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", - "iEEGCoordinateSystem": "Talairach", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Talairach space RAS", - "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" -} + "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", + "iEEGCoordinateSystem": "Talairach", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Talairach space RAS", + "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-cc/ses-01/ieeg/sub-cc_ses-01_space-ACPC_coordsystem.json b/ieeg_motorMiller2007/sub-cc/ses-01/ieeg/sub-cc_ses-01_space-ACPC_coordsystem.json index 63fabd932..b23055c82 100644 --- a/ieeg_motorMiller2007/sub-cc/ses-01/ieeg/sub-cc_ses-01_space-ACPC_coordsystem.json +++ b/ieeg_motorMiller2007/sub-cc/ses-01/ieeg/sub-cc_ses-01_space-ACPC_coordsystem.json @@ -1,8 +1,8 @@ { - "IntendedFor": "/derivatives/surfaces/sub-cc/ses-01/anat/sub-cc_pial.surf.gii", - "iEEGCoordinateSystem": "ACPC", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right", - "iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth", - "iEEGCoordinateProcessingDescription": "surface_projection_Hermes" -} + "IntendedFor": "/derivatives/surfaces/sub-cc/ses-01/anat/sub-cc_pial.surf.gii", + "iEEGCoordinateSystem": "ACPC", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right", + "iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth", + "iEEGCoordinateProcessingDescription": "surface_projection_Hermes" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-cc/ses-01/ieeg/sub-cc_ses-01_space-Talairach_coordsystem.json b/ieeg_motorMiller2007/sub-cc/ses-01/ieeg/sub-cc_ses-01_space-Talairach_coordsystem.json index 657219191..3ca9ed27f 100644 --- a/ieeg_motorMiller2007/sub-cc/ses-01/ieeg/sub-cc_ses-01_space-Talairach_coordsystem.json +++ b/ieeg_motorMiller2007/sub-cc/ses-01/ieeg/sub-cc_ses-01_space-Talairach_coordsystem.json @@ -1,7 +1,7 @@ { - "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", - "iEEGCoordinateSystem": "Talairach", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Talairach space RAS", - "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" -} + "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", + "iEEGCoordinateSystem": "Talairach", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Talairach space RAS", + "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-de/ses-01/ieeg/sub-de_ses-01_space-Talairach_coordsystem.json b/ieeg_motorMiller2007/sub-de/ses-01/ieeg/sub-de_ses-01_space-Talairach_coordsystem.json index 657219191..3ca9ed27f 100644 --- a/ieeg_motorMiller2007/sub-de/ses-01/ieeg/sub-de_ses-01_space-Talairach_coordsystem.json +++ b/ieeg_motorMiller2007/sub-de/ses-01/ieeg/sub-de_ses-01_space-Talairach_coordsystem.json @@ -1,7 +1,7 @@ { - "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", - "iEEGCoordinateSystem": "Talairach", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Talairach space RAS", - "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" -} + "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", + "iEEGCoordinateSystem": "Talairach", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Talairach space RAS", + "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-fp/ses-01/ieeg/sub-fp_ses-01_space-Talairach_coordsystem.json b/ieeg_motorMiller2007/sub-fp/ses-01/ieeg/sub-fp_ses-01_space-Talairach_coordsystem.json index 657219191..3ca9ed27f 100644 --- a/ieeg_motorMiller2007/sub-fp/ses-01/ieeg/sub-fp_ses-01_space-Talairach_coordsystem.json +++ b/ieeg_motorMiller2007/sub-fp/ses-01/ieeg/sub-fp_ses-01_space-Talairach_coordsystem.json @@ -1,7 +1,7 @@ { - "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", - "iEEGCoordinateSystem": "Talairach", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Talairach space RAS", - "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" -} + "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", + "iEEGCoordinateSystem": "Talairach", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Talairach space RAS", + "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-gc/ses-01/ieeg/sub-gc_ses-01_space-Talairach_coordsystem.json b/ieeg_motorMiller2007/sub-gc/ses-01/ieeg/sub-gc_ses-01_space-Talairach_coordsystem.json index 657219191..3ca9ed27f 100644 --- a/ieeg_motorMiller2007/sub-gc/ses-01/ieeg/sub-gc_ses-01_space-Talairach_coordsystem.json +++ b/ieeg_motorMiller2007/sub-gc/ses-01/ieeg/sub-gc_ses-01_space-Talairach_coordsystem.json @@ -1,7 +1,7 @@ { - "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", - "iEEGCoordinateSystem": "Talairach", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Talairach space RAS", - "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" -} + "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", + "iEEGCoordinateSystem": "Talairach", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Talairach space RAS", + "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-hh/ses-01/ieeg/sub-hh_ses-01_space-Talairach_coordsystem.json b/ieeg_motorMiller2007/sub-hh/ses-01/ieeg/sub-hh_ses-01_space-Talairach_coordsystem.json index 657219191..3ca9ed27f 100644 --- a/ieeg_motorMiller2007/sub-hh/ses-01/ieeg/sub-hh_ses-01_space-Talairach_coordsystem.json +++ b/ieeg_motorMiller2007/sub-hh/ses-01/ieeg/sub-hh_ses-01_space-Talairach_coordsystem.json @@ -1,7 +1,7 @@ { - "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", - "iEEGCoordinateSystem": "Talairach", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Talairach space RAS", - "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" -} + "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", + "iEEGCoordinateSystem": "Talairach", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Talairach space RAS", + "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-hl/ses-01/ieeg/sub-hl_ses-01_space-ACPC_coordsystem.json b/ieeg_motorMiller2007/sub-hl/ses-01/ieeg/sub-hl_ses-01_space-ACPC_coordsystem.json index 186be85d6..9c88a9d06 100644 --- a/ieeg_motorMiller2007/sub-hl/ses-01/ieeg/sub-hl_ses-01_space-ACPC_coordsystem.json +++ b/ieeg_motorMiller2007/sub-hl/ses-01/ieeg/sub-hl_ses-01_space-ACPC_coordsystem.json @@ -1,8 +1,8 @@ { - "IntendedFor": "/derivatives/surfaces/sub-hl/ses-01/anat/sub-hl_pial.surf.gii", - "iEEGCoordinateSystem": "ACPC", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right", - "iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth", - "iEEGCoordinateProcessingDescription": "surface_projection_Hermes" -} + "IntendedFor": "/derivatives/surfaces/sub-hl/ses-01/anat/sub-hl_pial.surf.gii", + "iEEGCoordinateSystem": "ACPC", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right", + "iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth", + "iEEGCoordinateProcessingDescription": "surface_projection_Hermes" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-hl/ses-01/ieeg/sub-hl_ses-01_space-Talairach_coordsystem.json b/ieeg_motorMiller2007/sub-hl/ses-01/ieeg/sub-hl_ses-01_space-Talairach_coordsystem.json index 657219191..3ca9ed27f 100644 --- a/ieeg_motorMiller2007/sub-hl/ses-01/ieeg/sub-hl_ses-01_space-Talairach_coordsystem.json +++ b/ieeg_motorMiller2007/sub-hl/ses-01/ieeg/sub-hl_ses-01_space-Talairach_coordsystem.json @@ -1,7 +1,7 @@ { - "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", - "iEEGCoordinateSystem": "Talairach", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Talairach space RAS", - "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" -} + "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", + "iEEGCoordinateSystem": "Talairach", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Talairach space RAS", + "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-jc/ses-01/ieeg/sub-jc_ses-01_space-ACPC_coordsystem.json b/ieeg_motorMiller2007/sub-jc/ses-01/ieeg/sub-jc_ses-01_space-ACPC_coordsystem.json index 893e24da1..c90d2db61 100644 --- a/ieeg_motorMiller2007/sub-jc/ses-01/ieeg/sub-jc_ses-01_space-ACPC_coordsystem.json +++ b/ieeg_motorMiller2007/sub-jc/ses-01/ieeg/sub-jc_ses-01_space-ACPC_coordsystem.json @@ -1,8 +1,8 @@ { - "IntendedFor": "/derivatives/surfaces/sub-jc/ses-01/anat/sub-jc_pial.surf.gii", - "iEEGCoordinateSystem": "ACPC", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right", - "iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth", - "iEEGCoordinateProcessingDescription": "surface_projection_Hermes" -} + "IntendedFor": "/derivatives/surfaces/sub-jc/ses-01/anat/sub-jc_pial.surf.gii", + "iEEGCoordinateSystem": "ACPC", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right", + "iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth", + "iEEGCoordinateProcessingDescription": "surface_projection_Hermes" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-jc/ses-01/ieeg/sub-jc_ses-01_space-Talairach_coordsystem.json b/ieeg_motorMiller2007/sub-jc/ses-01/ieeg/sub-jc_ses-01_space-Talairach_coordsystem.json index 657219191..3ca9ed27f 100644 --- a/ieeg_motorMiller2007/sub-jc/ses-01/ieeg/sub-jc_ses-01_space-Talairach_coordsystem.json +++ b/ieeg_motorMiller2007/sub-jc/ses-01/ieeg/sub-jc_ses-01_space-Talairach_coordsystem.json @@ -1,7 +1,7 @@ { - "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", - "iEEGCoordinateSystem": "Talairach", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Talairach space RAS", - "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" -} + "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", + "iEEGCoordinateSystem": "Talairach", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Talairach space RAS", + "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-jm/ses-01/ieeg/sub-jm_ses-01_space-Talairach_coordsystem.json b/ieeg_motorMiller2007/sub-jm/ses-01/ieeg/sub-jm_ses-01_space-Talairach_coordsystem.json index 01473a2db..dc7987ffe 100644 --- a/ieeg_motorMiller2007/sub-jm/ses-01/ieeg/sub-jm_ses-01_space-Talairach_coordsystem.json +++ b/ieeg_motorMiller2007/sub-jm/ses-01/ieeg/sub-jm_ses-01_space-Talairach_coordsystem.json @@ -1,7 +1,7 @@ { - "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/ssub-Talairach_hemi-R_pial.surf.gii", - "iEEGCoordinateSystem": "Talairach", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Talairach space RAS", - "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" -} + "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/ssub-Talairach_hemi-R_pial.surf.gii", + "iEEGCoordinateSystem": "Talairach", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Talairach space RAS", + "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-jt/ses-01/ieeg/sub-jt_ses-01_space-Talairach_coordsystem.json b/ieeg_motorMiller2007/sub-jt/ses-01/ieeg/sub-jt_ses-01_space-Talairach_coordsystem.json index 657219191..3ca9ed27f 100644 --- a/ieeg_motorMiller2007/sub-jt/ses-01/ieeg/sub-jt_ses-01_space-Talairach_coordsystem.json +++ b/ieeg_motorMiller2007/sub-jt/ses-01/ieeg/sub-jt_ses-01_space-Talairach_coordsystem.json @@ -1,7 +1,7 @@ { - "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", - "iEEGCoordinateSystem": "Talairach", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Talairach space RAS", - "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" -} + "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", + "iEEGCoordinateSystem": "Talairach", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Talairach space RAS", + "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-rh/ses-01/ieeg/sub-rh_ses-01_space-Talairach_coordsystem.json b/ieeg_motorMiller2007/sub-rh/ses-01/ieeg/sub-rh_ses-01_space-Talairach_coordsystem.json index 657219191..3ca9ed27f 100644 --- a/ieeg_motorMiller2007/sub-rh/ses-01/ieeg/sub-rh_ses-01_space-Talairach_coordsystem.json +++ b/ieeg_motorMiller2007/sub-rh/ses-01/ieeg/sub-rh_ses-01_space-Talairach_coordsystem.json @@ -1,7 +1,7 @@ { - "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", - "iEEGCoordinateSystem": "Talairach", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Talairach space RAS", - "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" -} + "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", + "iEEGCoordinateSystem": "Talairach", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Talairach space RAS", + "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-rr/ses-01/ieeg/sub-rr_ses-01_space-Talairach_coordsystem.json b/ieeg_motorMiller2007/sub-rr/ses-01/ieeg/sub-rr_ses-01_space-Talairach_coordsystem.json index 657219191..3ca9ed27f 100644 --- a/ieeg_motorMiller2007/sub-rr/ses-01/ieeg/sub-rr_ses-01_space-Talairach_coordsystem.json +++ b/ieeg_motorMiller2007/sub-rr/ses-01/ieeg/sub-rr_ses-01_space-Talairach_coordsystem.json @@ -1,7 +1,7 @@ { - "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", - "iEEGCoordinateSystem": "Talairach", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Talairach space RAS", - "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" -} + "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", + "iEEGCoordinateSystem": "Talairach", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Talairach space RAS", + "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-ug/ses-01/ieeg/sub-ug_ses-01_space-Talairach_coordsystem.json b/ieeg_motorMiller2007/sub-ug/ses-01/ieeg/sub-ug_ses-01_space-Talairach_coordsystem.json index 657219191..3ca9ed27f 100644 --- a/ieeg_motorMiller2007/sub-ug/ses-01/ieeg/sub-ug_ses-01_space-Talairach_coordsystem.json +++ b/ieeg_motorMiller2007/sub-ug/ses-01/ieeg/sub-ug_ses-01_space-Talairach_coordsystem.json @@ -1,7 +1,7 @@ { - "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", - "iEEGCoordinateSystem": "Talairach", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Talairach space RAS", - "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" -} + "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", + "iEEGCoordinateSystem": "Talairach", + "iEEGCoordinateUnits": "mm", + "iEEGCoordinateSystemDescription": "Talairach space RAS", + "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-wc/ses-01/ieeg/sub-wc_ses-01_space-ACPC_coordsystem.json b/ieeg_motorMiller2007/sub-wc/ses-01/ieeg/sub-wc_ses-01_space-ACPC_coordsystem.json index 6d44d3417..2e0c1b9aa 100644 --- a/ieeg_motorMiller2007/sub-wc/ses-01/ieeg/sub-wc_ses-01_space-ACPC_coordsystem.json +++ b/ieeg_motorMiller2007/sub-wc/ses-01/ieeg/sub-wc_ses-01_space-ACPC_coordsystem.json @@ -1,8 +1,8 @@ { - "IntendedFor": "/derivatives/surfaces/sub-wc/ses-01/anat/sub-wc_pial.surf.gii", - "iEEGCoordinateSystem": "ACPC", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Coordinate system with the origin at anterior commissure (AC), negative y-axis going through the posterior commissure (PC), z-axis going to a mid-hemisperic point which lies superior to the AC-PC line, x-axis going to the right", - "iEEGCoordinateProcessingReference": "Hermes et al., 2010 JNeuroMeth", - "iEEGCoordinateProcessingDescription": "surface_projection_Hermes" -} + "IntendedFor": "/derivatives/surfaces/sub-wc/ses-01/anat/sub-wc_pial.surf.gii", + "iEEGCoordinateSystem": "ACPC", + 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"Hermes et al., 2010 JNeuroMeth", + "iEEGCoordinateProcessingDescription": "surface_projection_Hermes" +} \ No newline at end of file diff --git a/ieeg_motorMiller2007/sub-zt/ses-01/ieeg/sub-zt_ses-01_space-Talairach_coordsystem.json b/ieeg_motorMiller2007/sub-zt/ses-01/ieeg/sub-zt_ses-01_space-Talairach_coordsystem.json index 657219191..3ca9ed27f 100644 --- a/ieeg_motorMiller2007/sub-zt/ses-01/ieeg/sub-zt_ses-01_space-Talairach_coordsystem.json +++ b/ieeg_motorMiller2007/sub-zt/ses-01/ieeg/sub-zt_ses-01_space-Talairach_coordsystem.json @@ -1,7 +1,7 @@ { - "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", - "iEEGCoordinateSystem": "Talairach", - "iEEGCoordinateUnits": "mm", - "iEEGCoordinateSystemDescription": "Talairach space RAS", - "iEEGCoordinateProcessingReference": "Miller et al., 2007 JNeuroMeth" -} + "IntendedFor": "/derivatives/surfaces/sub-Talairach/ses-01/anat/sub-Talairach_hemi-R_pial.surf.gii", + "iEEGCoordinateSystem": 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the photo", - "IntendedFor": ["ses-01/micr/sub-01_ses-01_sample-A_SEM.png"] -} +{ + "PhotoDescription": "Description of the photo", + "IntendedFor": [ + "bids::sub-01/ses-01/micr/sub-01_ses-01_sample-A_SEM.png" + ] +} \ No newline at end of file diff --git a/micr_SEM/sub-01/ses-02/micr/sub-01_ses-02_sample-A_photo.json b/micr_SEM/sub-01/ses-02/micr/sub-01_ses-02_sample-A_photo.json index d538c2ef3..c65fcf5af 100644 --- a/micr_SEM/sub-01/ses-02/micr/sub-01_ses-02_sample-A_photo.json +++ b/micr_SEM/sub-01/ses-02/micr/sub-01_ses-02_sample-A_photo.json @@ -1,4 +1,6 @@ -{ - "PhotoDescription": "Description of the photo", - "IntendedFor": ["ses-02/micr/sub-01_ses-02_sample-A_SEM.png"] -} +{ + "PhotoDescription": "Description of the photo", + "IntendedFor": [ + "bids::sub-01/ses-02/micr/sub-01_ses-02_sample-A_SEM.png" + ] +} \ No newline at end of file diff --git a/micr_SPIM/sub-01/micr/sub-01_sample-A_photo.json b/micr_SPIM/sub-01/micr/sub-01_sample-A_photo.json index e3a4b8935..d73399864 100644 --- a/micr_SPIM/sub-01/micr/sub-01_sample-A_photo.json +++ b/micr_SPIM/sub-01/micr/sub-01_sample-A_photo.json @@ -1,7 +1,9 @@ -{ - "PhotoDescription": "Description of the photo", - "IntendedFor": ["micr/sub-01_sample-A_stain-LFB_chunk-01_SPIM.ome.tif", - "micr/sub-01_sample-A_stain-LFB_chunk-02_SPIM.ome.tif", - "micr/sub-01_sample-A_stain-LFB_chunk-03_SPIM.ome.tif", - "micr/sub-01_sample-A_stain-LFB_chunk-04_SPIM.ome.tif"] -} +{ + "PhotoDescription": "Description of the photo", + "IntendedFor": [ + "bids::sub-01/micr/sub-01_sample-A_stain-LFB_chunk-01_SPIM.ome.tif", + "bids::sub-01/micr/sub-01_sample-A_stain-LFB_chunk-02_SPIM.ome.tif", + "bids::sub-01/micr/sub-01_sample-A_stain-LFB_chunk-03_SPIM.ome.tif", + "bids::sub-01/micr/sub-01_sample-A_stain-LFB_chunk-04_SPIM.ome.tif" + ] +} \ No newline at end of file diff --git a/micr_SPIM/sub-01/micr/sub-01_sample-B_photo.json b/micr_SPIM/sub-01/micr/sub-01_sample-B_photo.json index 19ed6edfa..2448831d1 100644 --- a/micr_SPIM/sub-01/micr/sub-01_sample-B_photo.json +++ b/micr_SPIM/sub-01/micr/sub-01_sample-B_photo.json @@ -1,7 +1,9 @@ -{ - "PhotoDescription": "Description of the photo", - "IntendedFor": ["micr/sub-01_sample-B_stain-LFB_chunk-01_SPIM.ome.tif", - "micr/sub-01_sample-B_stain-LFB_chunk-02_SPIM.ome.tif", - "micr/sub-01_sample-B_stain-LFB_chunk-03_SPIM.ome.tif", - "micr/sub-01_sample-B_stain-LFB_chunk-04_SPIM.ome.tif"] -} +{ + "PhotoDescription": "Description of the photo", + "IntendedFor": [ + "bids::sub-01/micr/sub-01_sample-B_stain-LFB_chunk-01_SPIM.ome.tif", + "bids::sub-01/micr/sub-01_sample-B_stain-LFB_chunk-02_SPIM.ome.tif", + "bids::sub-01/micr/sub-01_sample-B_stain-LFB_chunk-03_SPIM.ome.tif", + "bids::sub-01/micr/sub-01_sample-B_stain-LFB_chunk-04_SPIM.ome.tif" + ] +} \ No newline at end of file diff --git a/qmri_mp2rageme/sub-1/fmap/sub-1_TB1map.json b/qmri_mp2rageme/sub-1/fmap/sub-1_TB1map.json index 547995a80..6494bc65d 100644 --- a/qmri_mp2rageme/sub-1/fmap/sub-1_TB1map.json +++ b/qmri_mp2rageme/sub-1/fmap/sub-1_TB1map.json @@ -1,14 +1,14 @@ { - "IntendedFor": [ - "anat/sub-1_echo-1_inv-2_part-mag_MP2RAGE.nii", - "anat/sub-1_echo-1_inv-2_part-phase_MP2RAGE.nii", - "anat/sub-1_echo-2_inv-2_part-mag_MP2RAGE.nii", - "anat/sub-1_echo-2_inv-2_part-phase_MP2RAGE.nii", - "anat/sub-1_echo-3_inv-2_part-mag_MP2RAGE.nii", - "anat/sub-1_echo-3_inv-2_part-phase_MP2RAGE.nii", - "anat/sub-1_echo-4_inv-2_part-mag_MP2RAGE.nii", - "anat/sub-1_echo-4_inv-2_part-phase_MP2RAGE.nii", - "anat/sub-1_inv-1_part-mag_MP2RAGE.nii", - "anat/sub-1_inv-1_part-phase_MP2RAGE.nii" - ] -} + "IntendedFor": [ + "bids::sub-1/anat/sub-1_echo-1_inv-2_part-mag_MP2RAGE.nii", + "bids::sub-1/anat/sub-1_echo-1_inv-2_part-phase_MP2RAGE.nii", + "bids::sub-1/anat/sub-1_echo-2_inv-2_part-mag_MP2RAGE.nii", + "bids::sub-1/anat/sub-1_echo-2_inv-2_part-phase_MP2RAGE.nii", + "bids::sub-1/anat/sub-1_echo-3_inv-2_part-mag_MP2RAGE.nii", + "bids::sub-1/anat/sub-1_echo-3_inv-2_part-phase_MP2RAGE.nii", + "bids::sub-1/anat/sub-1_echo-4_inv-2_part-mag_MP2RAGE.nii", + "bids::sub-1/anat/sub-1_echo-4_inv-2_part-phase_MP2RAGE.nii", + "bids::sub-1/anat/sub-1_inv-1_part-mag_MP2RAGE.nii", + "bids::sub-1/anat/sub-1_inv-1_part-phase_MP2RAGE.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/derivatives/hmri/sub-01/fmap/sub-01_TB1map.json b/qmri_mpm/derivatives/hmri/sub-01/fmap/sub-01_TB1map.json index b7c73bfa8..ee404d8c8 100644 --- a/qmri_mpm/derivatives/hmri/sub-01/fmap/sub-01_TB1map.json +++ b/qmri_mpm/derivatives/hmri/sub-01/fmap/sub-01_TB1map.json @@ -1,32 +1,32 @@ { - "IntendedFor": [ - "anat/sub-01_PDmap.nii.gz", - "anat/sub-01_MTmap.nii.gz", - "anat/sub-01_R1map.nii.gz", - "anat/sub-01_R2starmap.nii.gz" - ], - "RawSources": [ - "sub-01/fmap/sub-01_echo-1_flip-01_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-1_flip-02_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-1_flip-03_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-1_flip-04_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-1_flip-05_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-1_flip-06_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-1_flip-07_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-1_flip-08_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-1_flip-09_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-1_flip-10_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-1_flip-11_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-2_flip-01_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-2_flip-02_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-2_flip-03_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-2_flip-04_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-2_flip-05_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-2_flip-06_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-2_flip-07_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-2_flip-08_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-2_flip-09_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-2_flip-10_TB1EPI.nii", - "sub-01/fmap/sub-01_echo-2_flip-11_TB1EPI.nii" - ] -} + "IntendedFor": [ + "bids::sub-01/anat/sub-01_PDmap.nii.gz", + "bids::sub-01/anat/sub-01_MTmap.nii.gz", + "bids::sub-01/anat/sub-01_R1map.nii.gz", + "bids::sub-01/anat/sub-01_R2starmap.nii.gz" + ], + "RawSources": [ + "sub-01/fmap/sub-01_echo-1_flip-01_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-1_flip-02_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-1_flip-03_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-1_flip-04_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-1_flip-05_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-1_flip-06_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-1_flip-07_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-1_flip-08_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-1_flip-09_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-1_flip-10_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-1_flip-11_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-2_flip-01_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-2_flip-02_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-2_flip-03_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-2_flip-04_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-2_flip-05_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-2_flip-06_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-2_flip-07_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-2_flip-08_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-2_flip-09_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-2_flip-10_TB1EPI.nii", + "sub-01/fmap/sub-01_echo-2_flip-11_TB1EPI.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/derivatives/hmri/sub-01/fmap/sub-01_acq-MTw_RB1map.json b/qmri_mpm/derivatives/hmri/sub-01/fmap/sub-01_acq-MTw_RB1map.json index 68c544ced..61199508e 100644 --- a/qmri_mpm/derivatives/hmri/sub-01/fmap/sub-01_acq-MTw_RB1map.json +++ b/qmri_mpm/derivatives/hmri/sub-01/fmap/sub-01_acq-MTw_RB1map.json @@ -1,14 +1,14 @@ { - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii" - ], - "RawSources": [ - "sub-01/fmap/sub-01_acq-bodyMTw_RB1COR.nii", - "sub-01/fmap/sub-01_acq-headMTw_RB1COR.nii" - ] -} + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii" + ], + "RawSources": [ + "sub-01/fmap/sub-01_acq-bodyMTw_RB1COR.nii", + "sub-01/fmap/sub-01_acq-headMTw_RB1COR.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/derivatives/hmri/sub-01/fmap/sub-01_acq-PDw_RB1map.json b/qmri_mpm/derivatives/hmri/sub-01/fmap/sub-01_acq-PDw_RB1map.json index 4d34c98b6..e2bac9de5 100644 --- a/qmri_mpm/derivatives/hmri/sub-01/fmap/sub-01_acq-PDw_RB1map.json +++ b/qmri_mpm/derivatives/hmri/sub-01/fmap/sub-01_acq-PDw_RB1map.json @@ -1,16 +1,16 @@ { - "IntendedFor": [ - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii" - ], - "RawSources": [ - "sub-01/fmap/sub-01_acq-bodyPDw_RB1COR.nii", - "sub-01/fmap/sub-01_acq-headPDw_RB1COR.nii" - ] -} + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii" + ], + "RawSources": [ + "sub-01/fmap/sub-01_acq-bodyPDw_RB1COR.nii", + "sub-01/fmap/sub-01_acq-headPDw_RB1COR.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/derivatives/hmri/sub-01/fmap/sub-01_acq-T1w_RB1map.json b/qmri_mpm/derivatives/hmri/sub-01/fmap/sub-01_acq-T1w_RB1map.json index afae8b32b..acf6d2241 100644 --- a/qmri_mpm/derivatives/hmri/sub-01/fmap/sub-01_acq-T1w_RB1map.json +++ b/qmri_mpm/derivatives/hmri/sub-01/fmap/sub-01_acq-T1w_RB1map.json @@ -1,16 +1,16 @@ { - "IntendedFor": [ - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ], - "RawSources": [ - "sub-01/fmap/sub-01_acq-bodyT1w_RB1COR.nii", - "sub-01/fmap/sub-01_acq-headT1w_RB1COR.nii" - ] -} + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ], + "RawSources": [ + "sub-01/fmap/sub-01_acq-bodyT1w_RB1COR.nii", + "sub-01/fmap/sub-01_acq-headT1w_RB1COR.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_acq-bodyMTw_RB1COR.json b/qmri_mpm/sub-01/fmap/sub-01_acq-bodyMTw_RB1COR.json index 528f28537..629f1fb13 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_acq-bodyMTw_RB1COR.json +++ b/qmri_mpm/sub-01/fmap/sub-01_acq-bodyMTw_RB1COR.json @@ -1,24 +1,24 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "sm3d_1a3d1", - "PulseSequenceDetails": "mfc_smaps_v1a_QBC ", - "RepetitionTimeExcitation": 0.006, - "EchoTime": 0.0022, - "FlipAngle": 6, - "MTState": false, - "NumberShots": 1, - "PhaseEncodingDirection": "j", - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "sm3d_1a3d1", + "PulseSequenceDetails": "mfc_smaps_v1a_QBC ", + "RepetitionTimeExcitation": 0.006, + "EchoTime": 0.0022, + "FlipAngle": 6, + "MTState": false, + "NumberShots": 1, + "PhaseEncodingDirection": "j", + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_acq-bodyPDw_RB1COR.json b/qmri_mpm/sub-01/fmap/sub-01_acq-bodyPDw_RB1COR.json index b15c1ad45..4aef6934c 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_acq-bodyPDw_RB1COR.json +++ b/qmri_mpm/sub-01/fmap/sub-01_acq-bodyPDw_RB1COR.json @@ -1,26 +1,26 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "sm3d_1a3d1", - "PulseSequenceDetails": "mfc_smaps_v1a_QBC ", - "RepetitionTimeExcitation": 0.006, - "EchoTime": 0.0022, - "FlipAngle": 6, - "MTState": false, - "NumberShots": 1, - "PhaseEncodingDirection": "j", - "IntendedFor": [ - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "sm3d_1a3d1", + "PulseSequenceDetails": "mfc_smaps_v1a_QBC ", + "RepetitionTimeExcitation": 0.006, + "EchoTime": 0.0022, + "FlipAngle": 6, + "MTState": false, + "NumberShots": 1, + "PhaseEncodingDirection": "j", + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_acq-bodyT1w_RB1COR.json b/qmri_mpm/sub-01/fmap/sub-01_acq-bodyT1w_RB1COR.json index 5d45c291f..d74d503de 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_acq-bodyT1w_RB1COR.json +++ b/qmri_mpm/sub-01/fmap/sub-01_acq-bodyT1w_RB1COR.json @@ -1,26 +1,26 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "sm3d_1a3d1", - "PulseSequenceDetails": "mfc_smaps_v1a_QBC ", - "RepetitionTimeExcitation": 0.006, - "EchoTime": 0.0022, - "FlipAngle": 6, - "MTState": false, - "NumberShots": 1, - "PhaseEncodingDirection": "j", - "IntendedFor": [ - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "sm3d_1a3d1", + "PulseSequenceDetails": "mfc_smaps_v1a_QBC ", + "RepetitionTimeExcitation": 0.006, + "EchoTime": 0.0022, + "FlipAngle": 6, + "MTState": false, + "NumberShots": 1, + "PhaseEncodingDirection": "j", + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_acq-headMTw_RB1COR.json b/qmri_mpm/sub-01/fmap/sub-01_acq-headMTw_RB1COR.json index 84b8a6d61..6316be629 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_acq-headMTw_RB1COR.json +++ b/qmri_mpm/sub-01/fmap/sub-01_acq-headMTw_RB1COR.json @@ -1,24 +1,24 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "sm3d_1a3d1", - "PulseSequenceDetails": "mfc_smaps_v1a_Array ", - "RepetitionTimeExcitation": 0.006, - "EchoTime": 0.0022, - "FlipAngle": 6, - "MTState": false, - "NumberShots": 1, - "PhaseEncodingDirection": "j", - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "sm3d_1a3d1", + "PulseSequenceDetails": "mfc_smaps_v1a_Array ", + "RepetitionTimeExcitation": 0.006, + "EchoTime": 0.0022, + "FlipAngle": 6, + "MTState": false, + "NumberShots": 1, + "PhaseEncodingDirection": "j", + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_acq-headPDw_RB1COR.json b/qmri_mpm/sub-01/fmap/sub-01_acq-headPDw_RB1COR.json index ea0dfc3e2..85c7c40d5 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_acq-headPDw_RB1COR.json +++ b/qmri_mpm/sub-01/fmap/sub-01_acq-headPDw_RB1COR.json @@ -1,26 +1,26 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "sm3d_1a3d1", - "PulseSequenceDetails": "mfc_smaps_v1a_Array ", - "RepetitionTimeExcitation": 0.006, - "EchoTime": 0.0022, - "FlipAngle": 6, - "MTState": false, - "NumberShots": 1, - "PhaseEncodingDirection": "j", - "IntendedFor": [ - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "sm3d_1a3d1", + "PulseSequenceDetails": "mfc_smaps_v1a_Array ", + "RepetitionTimeExcitation": 0.006, + "EchoTime": 0.0022, + "FlipAngle": 6, + "MTState": false, + "NumberShots": 1, + "PhaseEncodingDirection": "j", + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_acq-headT1w_RB1COR.json b/qmri_mpm/sub-01/fmap/sub-01_acq-headT1w_RB1COR.json index 6fd222375..24ce1e3f6 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_acq-headT1w_RB1COR.json +++ b/qmri_mpm/sub-01/fmap/sub-01_acq-headT1w_RB1COR.json @@ -1,26 +1,26 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "sm3d_1a3d1", - "PulseSequenceDetails": "mfc_smaps_v1a_Array ", - "RepetitionTimeExcitation": 0.006, - "EchoTime": 0.0022, - "FlipAngle": 6, - "MTState": false, - "NumberShots": 1, - "PhaseEncodingDirection": "j", - "IntendedFor": [ - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "sm3d_1a3d1", + "PulseSequenceDetails": "mfc_smaps_v1a_Array ", + "RepetitionTimeExcitation": 0.006, + "EchoTime": 0.0022, + "FlipAngle": 6, + "MTState": false, + "NumberShots": 1, + "PhaseEncodingDirection": "j", + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-01_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-01_TB1EPI.json index e20ae84c4..22ffff488 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-01_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-01_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.03906, - "FlipAngle": 65, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.03906, + "FlipAngle": 65, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-02_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-02_TB1EPI.json index 3969be218..3a70a9191 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-02_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-02_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.03906, - "FlipAngle": 70, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.03906, + "FlipAngle": 70, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-03_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-03_TB1EPI.json index a3e606115..a7221e202 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-03_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-03_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.03906, - "FlipAngle": 75, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.03906, + "FlipAngle": 75, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-04_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-04_TB1EPI.json index de13e2d8c..026197445 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-04_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-04_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.03906, - "FlipAngle": 80, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.03906, + "FlipAngle": 80, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-05_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-05_TB1EPI.json index a6f5298f9..c0e86a22a 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-05_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-05_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": 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"anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.03906, + "FlipAngle": 85, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-06_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-06_TB1EPI.json index 55dd8db41..756bbce58 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-06_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-06_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.03906, - "FlipAngle": 90, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.03906, + "FlipAngle": 90, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-07_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-07_TB1EPI.json index 8d1d4d4a7..73779ca59 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-07_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-07_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.03906, - "FlipAngle": 95, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.03906, + "FlipAngle": 95, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-08_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-08_TB1EPI.json index 009b337ad..c5c1348a3 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-08_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-08_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.03906, - "FlipAngle": 100, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.03906, + "FlipAngle": 100, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-09_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-09_TB1EPI.json index 3b2427fe7..4b1b0b776 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-09_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-09_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.03906, - "FlipAngle": 105, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.03906, + "FlipAngle": 105, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-10_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-10_TB1EPI.json index e8c5233cd..74da88929 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-10_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-10_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.03906, - "FlipAngle": 110, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.03906, + "FlipAngle": 110, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-11_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-11_TB1EPI.json index 918fae184..f90e6921b 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-11_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-1_flip-11_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.03906, - "FlipAngle": 115, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.03906, + "FlipAngle": 115, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-01_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-01_TB1EPI.json index 98bfb8cc6..b134b4b91 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-01_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-01_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": 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"anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.13, + "FlipAngle": 65, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-02_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-02_TB1EPI.json index 55f1121d1..e426a2003 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-02_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-02_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.13, - "FlipAngle": 70, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.13, + "FlipAngle": 70, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-03_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-03_TB1EPI.json index 68f8b4ab6..98e000ac0 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-03_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-03_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.13, - "FlipAngle": 75, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.13, + "FlipAngle": 75, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-04_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-04_TB1EPI.json index 6ec3c22ec..581f333b1 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-04_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-04_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.13, - "FlipAngle": 80, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.13, + "FlipAngle": 80, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-05_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-05_TB1EPI.json index 00a8da5ac..6ef02808c 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-05_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-05_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.13, - "FlipAngle": 85, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.13, + "FlipAngle": 85, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-06_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-06_TB1EPI.json index aa2a3b510..d4c858f9a 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-06_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-06_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.13, - "FlipAngle": 90, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - 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+ "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-07_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-07_TB1EPI.json index 446b66cf2..905efaa08 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-07_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-07_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.13, - "FlipAngle": 95, - "MTState": false, - "NumberShots": 11, - 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"anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.13, + "FlipAngle": 95, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + 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"bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-08_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-08_TB1EPI.json index bd68524fe..6ee54a0dd 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-08_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-08_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": 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"anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.13, + "FlipAngle": 100, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-09_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-09_TB1EPI.json index 7d52e7ced..ec17aaa23 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-09_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-09_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.13, - "FlipAngle": 105, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.13, + "FlipAngle": 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"bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-10_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-10_TB1EPI.json index fe55c9fa3..defe13c98 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-10_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-10_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.13, - "FlipAngle": 110, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.13, + "FlipAngle": 110, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-11_TB1EPI.json b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-11_TB1EPI.json index c687e1f45..cbbe12dab 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-11_TB1EPI.json +++ b/qmri_mpm/sub-01/fmap/sub-01_echo-2_flip-11_TB1EPI.json @@ -1,43 +1,43 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "RM", - "SequenceName": "seste1d3d2", - "PulseSequenceDetails": "mfc_seste_b1map_v1e ", - "RepetitionTimeExcitation": 0.5, - "EchoTime": 0.13, - "FlipAngle": 115, - "MTState": false, - "NumberShots": 11, - "TotalReadoutTime": 6720.006240000001, - "PhaseEncodingDirection": "j", - "MixingTime": 0.0338, - "SpoilingRFPhaseIncrement": 50, - "IntendedFor": [ - "anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", - "anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", - "anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "RM", + "SequenceName": "seste1d3d2", + "PulseSequenceDetails": "mfc_seste_b1map_v1e ", + "RepetitionTimeExcitation": 0.5, + "EchoTime": 0.13, + "FlipAngle": 115, + "MTState": false, + "NumberShots": 11, + "TotalReadoutTime": 6720.006240000001, + "PhaseEncodingDirection": "j", + "MixingTime": 0.0338, + "SpoilingRFPhaseIncrement": 50, + "IntendedFor": [ + "bids::sub-01/anat/sub-01_acq-MTw_echo-1_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-2_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-3_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-4_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-5_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-MTw_echo-6_flip-1_mt-on_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-1_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-2_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-3_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-4_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-5_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-6_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-7_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-PDw_echo-8_flip-1_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-1_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-2_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-3_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-4_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-5_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-6_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-7_flip-2_mt-off_MPM.nii", + "bids::sub-01/anat/sub-01_acq-T1w_echo-8_flip-2_mt-off_MPM.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_magnitude1.json b/qmri_mpm/sub-01/fmap/sub-01_magnitude1.json index 3a762fa4d..f08bca773 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_magnitude1.json +++ b/qmri_mpm/sub-01/fmap/sub-01_magnitude1.json @@ -1,24 +1,24 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "GR", - "SequenceName": "*fm2d2r ", - "PulseSequenceDetails": "gre_field_mapping_1acq_rl ", - "RepetitionTimeExcitation": 1.02, - "EchoTime": 0.01, - "FlipAngle": 90, - "MTState": false, - "NumberShots": 1, - "PhaseEncodingDirection": "j", - "IntendedFor": [ - "fmap/sub-01_acq-headMTw_RB1COR.nii", - "fmap/sub-01_acq-headPDw_RB1COR.nii", - "fmap/sub-01_acq-headT1w_RB1COR.nii", - "fmap/sub-01_acq-bodyMTw_RB1COR.nii", - "fmap/sub-01_acq-bodyPDw_RB1COR.nii", - "fmap/sub-01_acq-bodyT1w_RB1COR.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "GR", + "SequenceName": "*fm2d2r ", + "PulseSequenceDetails": "gre_field_mapping_1acq_rl ", + "RepetitionTimeExcitation": 1.02, + "EchoTime": 0.01, + "FlipAngle": 90, + "MTState": false, + "NumberShots": 1, + "PhaseEncodingDirection": "j", + "IntendedFor": [ + "bids::sub-01/fmap/sub-01_acq-headMTw_RB1COR.nii", + "bids::sub-01/fmap/sub-01_acq-headPDw_RB1COR.nii", + "bids::sub-01/fmap/sub-01_acq-headT1w_RB1COR.nii", + "bids::sub-01/fmap/sub-01_acq-bodyMTw_RB1COR.nii", + "bids::sub-01/fmap/sub-01_acq-bodyPDw_RB1COR.nii", + "bids::sub-01/fmap/sub-01_acq-bodyT1w_RB1COR.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_magnitude2.json b/qmri_mpm/sub-01/fmap/sub-01_magnitude2.json index af5eff1af..77138e016 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_magnitude2.json +++ b/qmri_mpm/sub-01/fmap/sub-01_magnitude2.json @@ -1,24 +1,24 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "GR", - "SequenceName": "*fm2d2r ", - "PulseSequenceDetails": "gre_field_mapping_1acq_rl ", - "RepetitionTimeExcitation": 1.02, - "EchoTime": 0.01246, - "FlipAngle": 90, - "MTState": false, - "NumberShots": 1, - "PhaseEncodingDirection": "j", - "IntendedFor": [ - "fmap/sub-01_acq-headMTw_RB1COR.nii", - "fmap/sub-01_acq-headPDw_RB1COR.nii", - "fmap/sub-01_acq-headT1w_RB1COR.nii", - "fmap/sub-01_acq-bodyMTw_RB1COR.nii", - "fmap/sub-01_acq-bodyPDw_RB1COR.nii", - "fmap/sub-01_acq-bodyT1w_RB1COR.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "GR", + "SequenceName": "*fm2d2r ", + "PulseSequenceDetails": "gre_field_mapping_1acq_rl ", + "RepetitionTimeExcitation": 1.02, + "EchoTime": 0.01246, + "FlipAngle": 90, + "MTState": false, + "NumberShots": 1, + "PhaseEncodingDirection": "j", + "IntendedFor": [ + "bids::sub-01/fmap/sub-01_acq-headMTw_RB1COR.nii", + "bids::sub-01/fmap/sub-01_acq-headPDw_RB1COR.nii", + "bids::sub-01/fmap/sub-01_acq-headT1w_RB1COR.nii", + "bids::sub-01/fmap/sub-01_acq-bodyMTw_RB1COR.nii", + "bids::sub-01/fmap/sub-01_acq-bodyPDw_RB1COR.nii", + "bids::sub-01/fmap/sub-01_acq-bodyT1w_RB1COR.nii" + ] +} \ No newline at end of file diff --git a/qmri_mpm/sub-01/fmap/sub-01_phasediff.json b/qmri_mpm/sub-01/fmap/sub-01_phasediff.json index c902e7d71..c46bd07d2 100644 --- a/qmri_mpm/sub-01/fmap/sub-01_phasediff.json +++ b/qmri_mpm/sub-01/fmap/sub-01_phasediff.json @@ -1,25 +1,25 @@ { - "Manufacturer": "SIEMENS ", - "ManufacturersModelName": "Prisma_fit", - "DeviceSerialNumber": "167025", - "StationName": "MRC35437", - "MagneticFieldStrength": 3, - "ScanningSequence": "GR", - "SequenceName": "*fm2d2r ", - "PulseSequenceDetails": "gre_field_mapping_1acq_rl ", - "RepetitionTimeExcitation": 1.02, - "EchoTime1": 0.01246, - "EchoTime2": 0.02, - "FlipAngle": 90, - "MTState": false, - "NumberShots": 1, - "PhaseEncodingDirection": "j", - "IntendedFor": [ - "fmap/sub-01_acq-headMTw_RB1COR.nii", - "fmap/sub-01_acq-headPDw_RB1COR.nii", - "fmap/sub-01_acq-headT1w_RB1COR.nii", - "fmap/sub-01_acq-bodyMTw_RB1COR.nii", - "fmap/sub-01_acq-bodyPDw_RB1COR.nii", - "fmap/sub-01_acq-bodyT1w_RB1COR.nii" - ] -} + "Manufacturer": "SIEMENS ", + "ManufacturersModelName": "Prisma_fit", + "DeviceSerialNumber": "167025", + "StationName": "MRC35437", + "MagneticFieldStrength": 3, + "ScanningSequence": "GR", + "SequenceName": "*fm2d2r ", + "PulseSequenceDetails": "gre_field_mapping_1acq_rl ", + "RepetitionTimeExcitation": 1.02, + "EchoTime1": 0.01246, + "EchoTime2": 0.02, + "FlipAngle": 90, + "MTState": false, + "NumberShots": 1, + "PhaseEncodingDirection": "j", + "IntendedFor": [ + "bids::sub-01/fmap/sub-01_acq-headMTw_RB1COR.nii", + "bids::sub-01/fmap/sub-01_acq-headPDw_RB1COR.nii", + "bids::sub-01/fmap/sub-01_acq-headT1w_RB1COR.nii", + "bids::sub-01/fmap/sub-01_acq-bodyMTw_RB1COR.nii", + "bids::sub-01/fmap/sub-01_acq-bodyPDw_RB1COR.nii", + "bids::sub-01/fmap/sub-01_acq-bodyT1w_RB1COR.nii" + ] +} \ No newline at end of file diff --git a/qmri_mtsat/derivatives/qMRLab/sub-01/fmap/sub-01_TB1map.json b/qmri_mtsat/derivatives/qMRLab/sub-01/fmap/sub-01_TB1map.json index 62d0042db..269260b1a 100644 --- a/qmri_mtsat/derivatives/qMRLab/sub-01/fmap/sub-01_TB1map.json +++ b/qmri_mtsat/derivatives/qMRLab/sub-01/fmap/sub-01_TB1map.json @@ -1,22 +1,24 @@ { - "RawSources": [ - "sub-01/fmap/sub-01_flip-01_TB1DAM.nii.gz", - "sub-01/fmap/sub-01_flip-02_TB1DAM.nii.gz" - ], - "IntendedFor": [ - "anat/sub-01_T1map.nii.gz" - ], - "MagneticFieldStrength": "3", - "Manufacturer": "Siemens", - "ManufacturerModelName": "Skyra", - "MRAcquisitionType": "3D", - "PulseSequenceType": "SPGR", - "FlipAngle": ["60","120"], - "EstimationPaper": "Insko et. al. JMRI, 1993", - "EstimationAlgorithm": "Linear", - "EstimationSoftwareName": "qMRLab", - "EstimationSoftwareLanguage": "MATLAB", - "EstimationSoftwareVersion": "2.4.1", - "EstimationSoftwareEnv": "OSX 10.14" - } - \ No newline at end of file + "RawSources": [ + "sub-01/fmap/sub-01_flip-01_TB1DAM.nii.gz", + "sub-01/fmap/sub-01_flip-02_TB1DAM.nii.gz" + ], + "IntendedFor": [ + "bids::sub-01/anat/sub-01_T1map.nii.gz" + ], + "MagneticFieldStrength": "3", + "Manufacturer": "Siemens", + "ManufacturerModelName": "Skyra", + "MRAcquisitionType": "3D", + "PulseSequenceType": "SPGR", + "FlipAngle": [ + "60", + "120" + ], + "EstimationPaper": "Insko et. al. JMRI, 1993", + "EstimationAlgorithm": "Linear", + "EstimationSoftwareName": "qMRLab", + "EstimationSoftwareLanguage": "MATLAB", + "EstimationSoftwareVersion": "2.4.1", + "EstimationSoftwareEnv": "OSX 10.14" +} \ No newline at end of file diff --git a/qmri_mtsat/sub-01/fmap/sub-01_flip-1_TB1DAM.json b/qmri_mtsat/sub-01/fmap/sub-01_flip-1_TB1DAM.json index 64b60eb02..1e8e751c3 100644 --- a/qmri_mtsat/sub-01/fmap/sub-01_flip-1_TB1DAM.json +++ b/qmri_mtsat/sub-01/fmap/sub-01_flip-1_TB1DAM.json @@ -1,8 +1,8 @@ { - "IntendedFor": [ - "anat/sub-01_flip-1_mt-off_MTS.nii.gz", - "anat/sub-01_flip-1_mt-on_MTS.nii.gz", - "anat/sub-01_flip-2_mt-off_MTS.nii.gz" - ], - "FlipAngle": "60" -} + "IntendedFor": [ + "bids::sub-01/anat/sub-01_flip-1_mt-off_MTS.nii.gz", + "bids::sub-01/anat/sub-01_flip-1_mt-on_MTS.nii.gz", + "bids::sub-01/anat/sub-01_flip-2_mt-off_MTS.nii.gz" + ], + "FlipAngle": "60" +} \ No newline at end of file diff --git a/qmri_mtsat/sub-01/fmap/sub-01_flip-2_TB1DAM.json b/qmri_mtsat/sub-01/fmap/sub-01_flip-2_TB1DAM.json index 76752713b..53bcc528f 100644 --- a/qmri_mtsat/sub-01/fmap/sub-01_flip-2_TB1DAM.json +++ b/qmri_mtsat/sub-01/fmap/sub-01_flip-2_TB1DAM.json @@ -1,8 +1,8 @@ { - "IntendedFor": [ - "anat/sub-01_flip-1_mt-off_MTS.nii.gz", - "anat/sub-01_flip-1_mt-on_MTS.nii.gz", - "anat/sub-01_flip-2_mt-off_MTS.nii.gz" - ], - "FlipAngle": "120" -} + "IntendedFor": [ + "bids::sub-01/anat/sub-01_flip-1_mt-off_MTS.nii.gz", + "bids::sub-01/anat/sub-01_flip-1_mt-on_MTS.nii.gz", + "bids::sub-01/anat/sub-01_flip-2_mt-off_MTS.nii.gz" + ], + "FlipAngle": "120" +} \ No newline at end of file diff --git a/qmri_vfa/derivatives/qMRLab/sub-01/fmap/sub-01_TB1map.json b/qmri_vfa/derivatives/qMRLab/sub-01/fmap/sub-01_TB1map.json index 2b03b7ed8..ca9f15e29 100644 --- a/qmri_vfa/derivatives/qMRLab/sub-01/fmap/sub-01_TB1map.json +++ b/qmri_vfa/derivatives/qMRLab/sub-01/fmap/sub-01_TB1map.json @@ -1,22 +1,31 @@ -{ "RawSources": [ - "sub-01/fmap/sub-01_acq-tr1_TB1AFI.nii.gz", - "sub-01/fmap/sub-01_acq-tr2_TB1AFI.nii.gz" - ], - "IntendedFor": [ - "anat/sub-01_T1map.nii.gz" - ], - "MagneticFieldStrength": "3", - "Manufacturer": "Siemens", - "ManufacturerModelName": "Skyra", - "MRAcquisitionType": "3D", - "PulseSequenceType": "SPGR", - "RepetitionTime": ["0.02","0.1"], - "SpoilingState": true, - "SpoilingType": "COMBINED", - "SpoilingGradientMoment": ["0.540","2.250"], - "SpoilingGradientDuration": ["0.1244","0.0622"], - "SpoilingRFPhaseIncrement": "39", - "FlipAngle": "60", - "EchoTime": "0.032" - } - \ No newline at end of file +{ + "RawSources": [ + "sub-01/fmap/sub-01_acq-tr1_TB1AFI.nii.gz", + "sub-01/fmap/sub-01_acq-tr2_TB1AFI.nii.gz" + ], + "IntendedFor": [ + "bids::sub-01/anat/sub-01_T1map.nii.gz" + ], + "MagneticFieldStrength": "3", + "Manufacturer": "Siemens", + "ManufacturerModelName": "Skyra", + "MRAcquisitionType": "3D", + "PulseSequenceType": "SPGR", + "RepetitionTime": [ + "0.02", + "0.1" + ], + "SpoilingState": true, + "SpoilingType": "COMBINED", + "SpoilingGradientMoment": [ + "0.540", + "2.250" + ], + "SpoilingGradientDuration": [ + "0.1244", + "0.0622" + ], + "SpoilingRFPhaseIncrement": "39", + "FlipAngle": "60", + "EchoTime": "0.032" +} \ No newline at end of file