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BioInstaller tool installation on bioshiny #18

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anupullanhi opened this issue Jan 3, 2020 · 1 comment

anupullanhi commented Jan 3, 2020

Hello

How can we install tools into Bioshiny using BioInstaller? Can we install all the required tools in one go rather than downloading it separately?

Thanking in advance for the help!

Regards

Collaborator

Miachol commented Jan 9, 2020

add the following two lines in your ~/.bashrc or other e.g. ~/.zshrc and reload it before install item:

export BIO_SOFTWARES_DB_ACTIVE="/.bioshiny/info.yaml"
export BIOSHINY_CONFIG="/.bioshiny/shiny.config.yaml”

I will be as soon as possible to add all the required command-line tools in the installation script.
Thanks.

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