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DESCRIPTION
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DESCRIPTION
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Package: TarCA
Type: Package
Title: Targeting coalescent analysis
Version: 0.1.0
Authors@R:
person(
given="Shanjun",
family="Deng",
role=c("aut","cre","ctb"),
email="[email protected]"
)
Description: The method, termed as targeting coalescent analysis (TCA), computes for all cells of a tissue the average coalescent rate at the monophyletic clades of the target tissue, the inverse of which then measures the progenitor number of the tissue.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.1
Depends:
R (>= 3.5.0),
dplyr,
tidyr
Imports:
ape,
castor,
ggplot2,
ggtree,
phytools,
stringr
Suggests:
parallel