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Incorporate BED files into the pipeline #3

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Tomik292 opened this issue Feb 1, 2024 · 0 comments
Open

Incorporate BED files into the pipeline #3

Tomik292 opened this issue Feb 1, 2024 · 0 comments
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enhancement New feature or request

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@Tomik292
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Tomik292 commented Feb 1, 2024

For each Sequencing library there is a BED file created that consist of important additional data for the analysis.
We've agreed with the pathologist that we should incorporate this file into the pipeline.

Pathologist will add the files into the seq server and add link to the seq_library table for us to know which BED files matches with which library.
We connect the BED file to a specific run (need to discuss if whole bed file, or just the information from it)
We update the upload of metadata to incorporate data from BED file

@Tomik292 Tomik292 added the enhancement New feature or request label Feb 1, 2024
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